CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88085	Canola	cytosol	94.25	94.25
CDX87135	Canola	cytosol	70.38	86.7
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.86	86.05
AT5G24240.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.84	84.84
VIT_16s0098g01890.t01	Wine grape	cytosol	61.67	60.51
PGSC0003DMT400023562	Potato	cytosol	60.8	60.17
GSMUA_Achr7P14510_001	Banana	cytosol	52.44	59.6
CDX83360	Canola	cytosol	32.4	59.24
Solyc03g083350.2.1	Tomato	cytosol	59.76	59.14
KRH64453	Soybean	cytosol	58.88	57.98
CDY27320	Canola	cytosol	48.43	56.85
GSMUA_Achr9P00160_001	Banana	cytosol	49.83	56.19
GSMUA_Achr6P22610_001	Banana	cytosol	49.3	55.82
GSMUA_Achr8P19700_001	Banana	cytosol	48.43	55.38
CDY66313	Canola	cytosol	53.14	55.35
GSMUA_Achr2P19790_001	Banana	cytosol	52.44	55.13
EER88404	Sorghum	cytosol, plastid	53.31	53.87
Zm00001d037056_P001	Maize	cytosol	52.79	53.35
HORVU7Hr1G081930.1	Barley	cytosol	52.26	52.72
CDY46532	Canola	cytosol	42.33	52.6
Os06t0340600-02	Rice	cytosol, endoplasmic reticulum	51.92	52.46
Os02t0290500-01	Rice	cytosol	51.57	52.39
TraesCS7B01G243500.1	Wheat	cytosol	51.92	52.37
TraesCS7D01G340200.1	Wheat	cytosol	51.92	52.37
TraesCS7A01G332000.1	Wheat	cytosol	51.92	52.28
Zm00001d046016_P001	Maize	cytosol, plastid	51.57	52.11
Os05t0590100-01	Rice	extracellular	53.14	52.05
EES06700	Sorghum	endoplasmic reticulum	50.35	51.42
CDY47844	Canola	plastid	46.69	51.34
CDY08380	Canola	cytosol	46.52	51.25
CDY64881	Canola	cytosol	43.73	51.02
Zm00001d009741_P001	Maize	plastid	47.39	49.19
KXG22662	Sorghum	cytosol	49.65	48.97
GSMUA_Achr6P26590_001	Banana	cytosol	46.34	48.9
CDX95703	Canola	cytosol	41.12	47.58
CDX89977	Canola	cytosol	16.55	30.55
CDY06957	Canola	cytosol, peroxisome, plastid	23.34	27.29
CDY14747	Canola	cytosol, peroxisome, plastid	23.0	26.88
CDY56175	Canola	cytosol	28.22	26.51
CDY48067	Canola	cytosol	27.35	25.49
CDX83526	Canola	cytosol	27.0	25.2
CDY16149	Canola	cytosol, mitochondrion, plastid	26.48	25.0
CDY34563	Canola	cytosol	26.66	24.76
CDX85013	Canola	mitochondrion	26.66	24.64
CDY36079	Canola	cytosol	26.48	24.6
CDY22484	Canola	cytosol, extracellular, vacuole	22.65	24.57
CDY35435	Canola	cytosol, extracellular, vacuole	22.65	24.57
CDX90007	Canola	cytosol	9.41	24.0
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	22.3	22.78
CDY27202	Canola	plasma membrane	22.65	12.37

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	GO:A0A078CWL7	EnsemblPlants:CDX80424	ProteinID:CDX80424	ProteinID:CDX80424.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00133494001	InterPro:IPR000403	InterPro:IPR000626
InterPro:Kinase-like_dom_sf	PFAM:PF00240	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PFscan:PS50053	PANTHER:PTHR10666
PANTHER:PTHR10666:SF90	SMART:SM00213	SUPFAM:SSF54236	SUPFAM:SSF56112	UniParc:UPI0004EB9035	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	SEG:seg	:	:	:	:

Description

BnaC07g30200D

Coordinates

chrLK031821:-:362370..364907

Molecular Weight (calculated)

63939.4 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.237

Length

574 amino acids

Sequence
(BLAST)

001: MSIASVALSP ALEEVVNFPG FIGRFGLDLD DPILIFLSIS GSLSPLRVME SDLIASVKLR IQSIKGFFVK KQKLGYDGRE PARNDSQVRD CCLADGELLH
101: LVIRLSDLQA ISVKTLGGKE FELFVERSRN VGYVKQKIAL RENELGNAWD HELTLDGEEL DDERLITDLC KDGENVIHLL IRKSGKVRAK PVEKDFEVFV
201: EDVTHNHNSV DGRRRLISPQ EKPKDFFLEP VFVNREIELA PLLKELIIST LEGLEKGNGP IKSSDGSGGA YFMQDPSGNK YVSVFKPIDE EPLAVNNPHG
301: QPVSVDGEGL KKGTQVGEGA FREVAAYILD YPMIGPRTFP HDQSGFAGVP PTTMVKCLHK DFNHPNGYSF SPENTKIGSL QMFVSNVGTC EDMGYGVFPV
401: DQVHKISVLD IRFANADRHG GNILVSRDGK DGQIVLTPID HGYCFPNKFE DCTFEWLYWP QAKEPYSSET LEYIKSLDAE QDIELLRLHG WEIPPSCARV
501: FRMSTMLLKQ GAAKGLTPFA IGSMMCRETL EKESVIEQII NDAEAIVLPE TAEEEFISTV SAIMDCCLDQ YSRN

Best Arabidopsis Sequence Match ( AT5G24240.2 )
(BLAST)

001: MSVASVALSP ALEELVNFPG IIGRFGFNLD DPILVFLTIA GSVIPKRVME SDSIASVKLR IQSIKGFFVK KQKLLYDGRE VSRNDSQIRD YGLADGKLLH
101: LVIRLSDLQA ISVRTVDGKE FELVVERSRN VGYVKQQIAS KEKELGIPRD HELTLDGEEL DDQRLITDLC QNGDNVIHLL ISKSAKVRAK PVGKDFEVFI
201: EDVNHKHNVD GRRGKNISSE AKPKEFFVEP FIVNPEIKLP ILLKELISST LEGLEKGNGP IRSSDGSGGA YFMQDPSGHK YVSVFKPIDE EPMAVNNPHG
301: QPVSVDGEGL KKGTQVGEGA IREVAAYILD YPMTGPRTFP HDQTGFAGVP PTTMVKCLHK DFNHPNGYSF SPENTKIGSL QMFVSNVGSC EDMGYRVFPV
401: DQVHKISVLD IRLANADRHA GNILVSRDGK DGQMVLTPID HGYCFPNKFE DCTFEWLYWP QAKEPYSSET LEYIKSLDPE KDIELLRFHG WEIPPSCTRV
501: LRISTMLLKK GSAKGLTPFT IGSIMCRETL KEESVIEQII HDAEAIVPTE TTEDEFISTV SAIMDNRLDQ YAWN

Arabidopsis Description

PI4KG3Phosphatidylinositol 4-kinase gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNF8]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.