CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G56600.3	Thale cress	peroxisome, plastid	71.89	75.37
CDY06957	Canola	cytosol, peroxisome, plastid	57.83	66.19
CDY14747	Canola	cytosol, peroxisome, plastid	57.83	66.19
CDY22484	Canola	cytosol, extracellular, vacuole	60.14	63.89
CDY35435	Canola	cytosol, extracellular, vacuole	59.96	63.71
KRG95041	Soybean	cytosol, plastid	43.24	52.48
KRH66669	Soybean	mitochondrion	42.7	50.1
CDY27202	Canola	plasma membrane	92.88	49.67
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	48.22	48.13
TraesCS3B01G215600.1	Wheat	plastid	33.99	46.14
TraesCS3D01G190000.1	Wheat	cytosol, plastid	33.81	45.89
TraesCS3A01G186000.1	Wheat	plastid	33.45	45.41
GSMUA_Achr5P27480_001	Banana	plastid	38.08	45.05
HORVU3Hr1G038320.1	Barley	plastid	33.27	44.95
Solyc10g078170.1.1	Tomato	cytosol, plastid	45.2	44.88
PGSC0003DMT400018507	Potato	cytosol, plastid	45.2	44.88
Zm00001d008265_P001	Maize	cytosol	34.34	43.57
EES00556	Sorghum	cytosol	35.23	42.95
Zm00001d040398_P001	Maize	plastid	34.34	39.07
Os01t0270700-00	Rice	mitochondrion	30.07	37.72
CDY48067	Canola	cytosol	39.86	36.36
CDX83526	Canola	cytosol	39.15	35.77
CDY16149	Canola	cytosol, mitochondrion, plastid	38.61	35.69
CDX85013	Canola	mitochondrion	39.32	35.59
CDY34563	Canola	cytosol	38.79	35.28
CDY36079	Canola	cytosol	38.61	35.11
CDY56175	Canola	cytosol	38.08	35.02
CDX83360	Canola	cytosol	16.55	29.62
CDY46532	Canola	cytosol	22.95	27.92
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.42	27.04
CDY64881	Canola	cytosol	23.67	27.03
CDX87135	Canola	cytosol	22.06	26.61
CDY27320	Canola	cytosol	22.78	26.18
CDY08380	Canola	cytosol	24.2	26.1
CDX89977	Canola	cytosol	14.23	25.72
CDY47844	Canola	plastid	23.67	25.48
CDY66313	Canola	cytosol	23.84	24.32
CDX95703	Canola	cytosol	20.64	23.39
CDX80424	Canola	cytosol	22.78	22.3
CDX90007	Canola	cytosol	8.9	22.22
CDX88085	Canola	cytosol	22.42	21.95

Protein Annotations

EnsemblPlants:CDX72124	EnsemblPlantsGene:GSBRNA2T00155940001	GO:A0A078C7J3	InterPro:IPR000403	InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245
PANTHER:PTHR15245:SF23	PFAM:PF00454	ProteinID:CDX72124	ProteinID:CDX72124.1	SEG:seg	UniParc:UPI0004EDBB3F
MapMan:27.5.2.3	:	:	:	:	:

Description

BnaC08g27500D

Coordinates

chrLK031795:-:2556540..2559012

Molecular Weight (calculated)

62243.6 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.186

Length

562 amino acids

Sequence
(BLAST)

001: MENERVFVKE LLRFATQKCC RFSDALFVQS FFVLSLNAFT CIQETCGDLQ FKEREIISAT INLRNTGMNC MALALDPLTD RFTHHYNRSS QRCRLQSLTN
101: LDFKFLDFNT KPTILTSSHS FNHRSVSTPC FSISSTNQYA SPEIEILGGR RVPTIRALVA EVTIALVSGA HPLLLPSGLG GAYLLQTGHG HSIAVAKPVD
201: EEPLAFNNPK GSGSGLKLGQ PGLKRSIRVG ESGIREVAAY LLDHQGFSSV PPTALVRISH VPFHSNDDGE AVASLQRYVG HDFDAGELGP GSFTVGSVHR
301: IGILDVRVLN LDRHAGNMLV KKIHNQDDES CCYNGVGAAE LVPIDHGLCL PECLDDPYFE WLNWPQASVP FTDAELQYIS NLDPFKDAEL LRTELGSIQE
401: ASIRVLFVCT MFLKQAAASG LCLAEIGEKM TRDICRGEES SSLLEILCTK AKASVFGGSY QEEEEDGDDD YSSEWDEVEA ELECCIFNFD EEFEELTEEM
501: SQVSKSHPVC VNHDDTEGVY FGNMSEDEWE MFLQMFQMLL PEALEGSTSK GPKPRFGSSC KF

Best Arabidopsis Sequence Match ( AT3G56600.1 )
(BLAST)

001: MNCMAVALDP LTDRFSQFSR SSQRCRLQSL TNLDFNFLGF NTKQTNLSAS SHSLNNRSVS TPCFSISGSN LDGSATPHIE ILGGQRVPTV RSLVAEVTIA
101: IVSGAQPLLL PSGLGGAYLL QTEKGNNIAV AKPVDEEPLA FNNPKGSGGL TLGQPGMKRS IRVGESGIRE LAAYLLDHQG FSSVPPTALV RISHVPFHDR
201: GSDHAAYKVA SLQRFVGHDF DAGELGPGSF TVVSVHRIGI LDVRVLNLDR HAGNMLVKKI HDQDETTCSN GVGAAELVPI DHGLCLPECL DDPYFEWLNW
301: PQASVPFTDI ELQYISNLDP FKDAELLRTE LDSIQESSLR VLIVCTIFLK EAAAAGLSLA EIGEKMTRDI CRGEESSSVL EILCNKAKAS AVSGSDDDDD
401: YSSEWNEVEA ELECGIFQFD DEVECKELPD MLQVPIFTRV PSIAANLSAL MRCPPNQWIS TYDTNIEEER RDRSIVRSKS HPICVNYDEK EGVYFGDMSG
501: DEWEMFLHSF QMLLPEALEG STSKGPKPRF GSSCKF

Arabidopsis Description

Phosphatidylinositol 4-kinase gamma-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU9]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.