Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72124 | Canola | mitochondrion, peroxisome, plasma membrane, vacuole | 75.37 | 71.89 |
| AT2G40850.1 | Thale cress | cytosol, extracellular, plasma membrane | 66.79 | 63.81 |
| KRG95041 | Soybean | cytosol, plastid | 47.2 | 54.64 |
| KRH66669 | Soybean | mitochondrion | 46.46 | 51.98 |
| VIT_08s0040g00680.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 52.05 | 49.56 |
| PGSC0003DMT400018507 | Potato | cytosol, plastid | 49.44 | 46.82 |
| Solyc10g078170.1.1 | Tomato | cytosol, plastid | 48.88 | 46.29 |
| TraesCS3B01G215600.1 | Wheat | plastid | 35.63 | 46.14 |
| TraesCS3D01G190000.1 | Wheat | cytosol, plastid | 35.45 | 45.89 |
| TraesCS3A01G186000.1 | Wheat | plastid | 35.26 | 45.65 |
| GSMUA_Achr5P27480_001 | Banana | plastid | 39.93 | 45.05 |
| HORVU3Hr1G038320.1 | Barley | plastid | 34.89 | 44.95 |
| EES00556 | Sorghum | cytosol | 37.5 | 43.6 |
| Zm00001d008265_P001 | Maize | cytosol | 36.01 | 43.57 |
| Zm00001d040398_P001 | Maize | plastid | 36.19 | 39.27 |
| CDY27202 | Canola | plasma membrane | 76.68 | 39.11 |
| Os01t0270700-00 | Rice | mitochondrion | 31.53 | 37.72 |
| AT1G26270.1 | Thale cress | cytosol | 42.16 | 35.87 |
| AT1G13640.1 | Thale cress | cytosol | 41.23 | 35.53 |
| AT2G03890.1 | Thale cress | cytosol | 42.54 | 35.08 |
| AT2G46500.1 | Thale cress | cytosol | 23.69 | 22.44 |
| AT5G24240.2 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.88 | 22.3 |
Protein Annotations
| MapMan:27.5.2.3 | EntrezGene:824827 | UniProt:A0A1I9LRU9 | ProteinID:ANM65307.1 | ArrayExpress:AT3G56600 | EnsemblPlantsGene:AT3G56600 |
| RefSeq:AT3G56600 | TAIR:AT3G56600 | RefSeq:AT3G56600-TAIR-G | EnsemblPlants:AT3G56600.3 | Unigene:At.34920 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | InterPro:IPR000403 | RefSeq:NP_001327285.1 | RefSeq:NP_191219.2 | PFAM:PF00454 | InterPro:PI3/4_kinase_cat_dom |
| PANTHER:PTHR15245 | PANTHER:PTHR15245:SF23 | UniParc:UPI0000DB5479 | SEG:seg | : | : |
Description
Phosphatidylinositol 4-kinase gamma-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU9]
Coordinates
chr3:+:20968444..20971021
Molecular Weight (calculated)
58727.4 Da
IEP (calculated)
4.604
GRAVY (calculated)
-0.197
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MNCMAVALDP LTDRFSQFSR SSQRCRLQSL TNLDFNFLGF NTKQTNLSAS SHSLNNRSVS TPCFSISGSN LDGSATPHIE ILGGQRVPTV RSLVAEVTIA
101: IVSGAQPLLL PSGLGGAYLL QTEKGNNIAV AKPVDEEPLA FNNPKGSGGL TLGQPGMKRS IRVGESGIRE LAAYLLDHQG FSSVPPTALV RISHVPFHDR
201: GSDHAAYKVA SLQRFVGHDF DAGELGPGSF TVVSVHRIGI LDVRVLNLDR HAGNMLVKKI HDQDETTCSN GVGAAELVPI DHGLCLPECL DDPYFEWLNW
301: PQASVPFTDI ELQYISNLDP FKDAELLRTE LDSIQESSLR VLIVCTIFLK EAAAAGLSLA EIGEKMTRDI CRGEESSSVL EILCNKAKAS AVSGSDDDDD
401: YSSEWNEVEA ELECGIFQFD DEVECKELPD MLQVPIFTRV PSIAANLSAL MRCPPNQWIS TYDTNIEEER RDRSIVRSKS HPICVNYDEK EGVYFGDMSG
501: DEWEMFLHSF QMLLPEALEG STSKGPKPRF GSSCKF
101: IVSGAQPLLL PSGLGGAYLL QTEKGNNIAV AKPVDEEPLA FNNPKGSGGL TLGQPGMKRS IRVGESGIRE LAAYLLDHQG FSSVPPTALV RISHVPFHDR
201: GSDHAAYKVA SLQRFVGHDF DAGELGPGSF TVVSVHRIGI LDVRVLNLDR HAGNMLVKKI HDQDETTCSN GVGAAELVPI DHGLCLPECL DDPYFEWLNW
301: PQASVPFTDI ELQYISNLDP FKDAELLRTE LDSIQESSLR VLIVCTIFLK EAAAAGLSLA EIGEKMTRDI CRGEESSSVL EILCNKAKAS AVSGSDDDDD
401: YSSEWNEVEA ELECGIFQFD DEVECKELPD MLQVPIFTRV PSIAANLSAL MRCPPNQWIS TYDTNIEEER RDRSIVRSKS HPICVNYDEK EGVYFGDMSG
501: DEWEMFLHSF QMLLPEALEG STSKGPKPRF GSSCKF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.