Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025140.1-P | Field mustard | cytosol | 83.23 | 92.48 |
| CDY48067 | Canola | cytosol | 87.54 | 92.37 |
| CDX83526 | Canola | cytosol | 86.92 | 91.87 |
| AT1G13640.1 | Thale cress | cytosol | 74.77 | 78.14 |
| Solyc05g010810.1.1 | Tomato | extracellular | 72.92 | 74.06 |
| PGSC0003DMT400050546 | Potato | cytosol | 71.38 | 73.89 |
| VIT_01s0010g00600.t01 | Wine grape | cytosol | 68.77 | 71.18 |
| PGSC0003DMT400004869 | Potato | cytosol | 67.85 | 70.33 |
| Solyc04g005270.1.1 | Tomato | cytosol | 68.92 | 70.0 |
| AT1G26270.1 | Thale cress | cytosol | 65.38 | 67.46 |
| Os04t0668700-01 | Rice | cytosol, peroxisome, plastid | 56.92 | 61.16 |
| TraesCS2B01G570500.1 | Wheat | peroxisome | 56.92 | 59.87 |
| TraesCS2D01G541800.1 | Wheat | peroxisome | 57.23 | 59.14 |
| TraesCS2A01G540100.1 | Wheat | peroxisome | 57.38 | 59.02 |
| EES13055 | Sorghum | plastid | 56.46 | 58.72 |
| Zm00001d026559_P001 | Maize | plastid | 56.0 | 58.62 |
| HORVU2Hr1G118320.7 | Barley | mitochondrion, peroxisome, plastid | 56.77 | 57.39 |
| AT3G56600.3 | Thale cress | peroxisome, plastid | 35.08 | 42.54 |
| AT2G40850.1 | Thale cress | cytosol, extracellular, plasma membrane | 33.85 | 39.22 |
| AT2G46500.1 | Thale cress | cytosol | 24.46 | 28.09 |
| AT5G24240.2 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.46 | 27.7 |
Protein Annotations
| MapMan:27.5.2.3 | Gene3D:3.10.20.90 | EntrezGene:814915 | UniProt:A0A178VP74 | ProteinID:AAD24822.2 | ProteinID:AEC05763.1 |
| EMBL:AK229831 | ArrayExpress:AT2G03890 | EnsemblPlantsGene:AT2G03890 | RefSeq:AT2G03890 | TAIR:AT2G03890 | RefSeq:AT2G03890-TAIR-G |
| EnsemblPlants:AT2G03890.1 | TAIR:AT2G03890.1 | Symbol:ATPI4K GAMMA 7 | EMBL:AY056101 | Unigene:At.24594 | EMBL:BT002696 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004430 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 |
| GO:GO:0046854 | InterPro:IPR000403 | RefSeq:NP_565307.1 | ProteinID:OAP08270.1 | PFAM:PF00454 | InterPro:PI3/4_kinase_cat_dom |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR15245 | PANTHER:PTHR15245:SF11 | UniProt:Q9SI52 | SUPFAM:SSF54236 | UniParc:UPI00000ABEE7 |
| InterPro:Ubiquitin-like_domsf | SEG:seg | : | : | : | : |
Description
PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
Coordinates
chr2:+:1185458..1188681
Molecular Weight (calculated)
72765.7 Da
IEP (calculated)
6.391
GRAVY (calculated)
-0.449
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.