Factsheet for VIT_01s0010g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_12s0057g00690.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	VIT_12s0057g00690.t01	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050546	Potato	cytosol	81.21	81.21
Solyc05g010810.1.1	Tomato	extracellular	81.37	79.84
PGSC0003DMT400004869	Potato	cytosol	78.18	78.31
Solyc04g005270.1.1	Tomato	cytosol	78.66	77.19
VIT_17s0000g04780.t01	Wine grape	cytosol	74.52	74.4
KRH75169	Soybean	cytosol	75.16	73.87
KRH71011	Soybean	cytosol	74.52	72.78
AT1G26270.1	Thale cress	cytosol	71.5	71.27
VIT_14s0083g00880.t01	Wine grape	cytosol	70.54	71.22
Bra025140.1-P	Field mustard	cytosol	66.24	71.11
CDY48067	Canola	cytosol	69.75	71.1
CDY16149	Canola	cytosol, mitochondrion, plastid	68.79	71.05
Bra024724.1-P	Field mustard	plastid	69.75	70.65
AT1G13640.1	Thale cress	cytosol	69.43	70.1
CDX83526	Canola	cytosol	68.63	70.08
CDX85013	Canola	mitochondrion	69.11	69.89
CDY34563	Canola	cytosol	68.63	69.74
CDY36079	Canola	cytosol	68.47	69.58
Bra011020.1-P	Field mustard	cytosol	68.47	69.58
CDY56175	Canola	cytosol	67.04	68.9
AT2G03890.1	Thale cress	cytosol	71.18	68.77
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	63.53	65.95
Zm00001d026559_P001	Maize	plastid	62.26	62.96
EES13055	Sorghum	plastid	62.58	62.88
TraesCS2B01G570500.1	Wheat	peroxisome	61.15	62.14
TraesCS2D01G541800.1	Wheat	peroxisome	61.47	61.37
TraesCS2A01G540100.1	Wheat	peroxisome	61.47	61.08
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	60.99	59.56
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	38.85	43.34
VIT_02s0025g01610.t01	Wine grape	plastid	25.48	27.44
VIT_16s0098g01890.t01	Wine grape	cytosol	25.48	27.35
VIT_15s0046g00440.t01	Wine grape	plastid	24.52	26.74
VIT_10s0071g00180.t01	Wine grape	extracellular	1.91	10.71
VIT_10s0071g00170.t01	Wine grape	cytosol, extracellular	2.07	10.16
VIT_12s0059g00850.t01	Wine grape	cytosol	1.43	10.0

Protein Annotations

EntrezGene:100247983	wikigene:100247983	MapMan:27.5.2.3	EMBL:AM451290	ProteinID:CAN76598	ProteinID:CAN76598.1
ProteinID:CCB51150	ProteinID:CCB51150.1	ncoils:Coil	UniProt:F6HGE9	EMBL:FN595754	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR000403	EntrezGene:LOC100247983	wikigene:LOC100247983	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom
PANTHER:PTHR15245	PANTHER:PTHR15245:SF37	UniParc:UPI0002109097	ArrayExpress:VIT_01s0010g00600	EnsemblPlantsGene:VIT_01s0010g00600	EnsemblPlants:VIT_01s0010g00600.t01
unigene:Vvi.20225	RefSeq:XP_002267025	RefSeq:XP_002267025.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:15655668..15658116

Molecular Weight (calculated)

70284.6 Da

IEP (calculated)

5.463

GRAVY (calculated)

-0.403

Length

628 amino acids

Sequence
(BLAST)

001: MAVAVFKSPL SGEYHRSKRM EGKQPAGRRR VFVQTETGCV LGMDLDRGDN AHTVKRRLQL AFNVPTEESS LTFGDMVLKN DLSAVRNDSP LLLTRNFLHR
101: SSSTPCLSPT GKDIQQRDQS GPIEILGHSN QFARTKQLVK DIVKAIKIGV DPIPVHSGLG GAYYFRNSRG ESVAIVKPTD EEPFAPNNPK GFVGKALGQP
201: GLKRTVRVGE TGFREVAAYL LDYDHFANVP PTALVKITHS IFNVNDGVNG NKPHQKEQVS KIASFQQFIP HDFDASDHGT SSFPVAAVHR IGILDIRILN
301: TDRHAGNLLV RKLNDSAGRF AQVELIPIDH GLCLPESLED PYFEWIHWPQ ASIPFSEDEL EYIKNLDSIR DSEMLRMELP MIREACLRVL VLCTIFLKEA
401: AAFGLCLAEI GEMMSREFRG GEEEPSELEF VCLEARRLIA EREVLSPKAE GGEEVFQFDM DCEEDRFYFT PKMGADAFMN RGPLHFGIGG ANGRFQLSKL
501: EESIEEEEES EREGEQEDFA GIPTPAEVST ISKLSMSLKD TSLGEKSQKY LEAKPESSYL ANTSSGHRSA NEQLPTSMSF VKLADMNEEE WVLFLEKFQE
601: LLYPAFAKRK SVTLGQRQRQ RLGTSCQF

Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF

Arabidopsis Description

PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.