Factsheet for VIT_10s0071g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00850.t01	Wine grape	cytosol	67.86	84.44
VIT_10s0071g00170.t01	Wine grape	cytosol, extracellular	76.79	67.19
VIT_15s0046g00440.t01	Wine grape	plastid	75.0	14.58
VIT_02s0025g01610.t01	Wine grape	plastid	55.36	10.63
VIT_16s0098g01890.t01	Wine grape	cytosol	55.36	10.6
VIT_17s0000g04780.t01	Wine grape	cytosol	12.5	2.23
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	10.71	2.13
VIT_14s0083g00880.t01	Wine grape	cytosol	10.71	1.93
VIT_01s0010g00600.t01	Wine grape	cytosol	10.71	1.91
Bra033288.1-P	Field mustard	cytosol	8.93	1.73
Bra033320.1-P	Field mustard	cytosol	2.68	0.96
CDX89977	Canola	cytosol	2.68	0.96
CDX90007	Canola	cytosol	0.89	0.44

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	ProteinID:CCB58890	ProteinID:CCB58890.1	UniProt:F6HW26	EMBL:FN596260
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	PFAM:PF00240	PANTHER:PTHR10666
PANTHER:PTHR10666:SF180	SUPFAM:SSF54236	SignalP:SignalP-noTM	UniParc:UPI0002109F46	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom
ArrayExpress:VIT_10s0071g00180	EnsemblPlantsGene:VIT_10s0071g00180	EnsemblPlants:VIT_10s0071g00180.t01	:	:	:

Description

No Description!

Coordinates

chr10:+:16346178..16354047

Molecular Weight (calculated)

12846.7 Da

IEP (calculated)

8.481

GRAVY (calculated)

-0.021

Length

112 amino acids

Sequence
(BLAST)

001: MFETMVVGWV VIISKLVCGD RELARNNSLV RDYGVSDGNV FHLVLKLSDL QIINVRTAYG KKFTFHVERS RDVGYVKQQV AKKEKGLVNV ENQEIMCDGK
101: WVDGKWICYC CI

Best Arabidopsis Sequence Match ( AT2G46500.3 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPTWWEHFDD
401: QGRKREARFG SYRPWILLA

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.