Factsheet for VIT_16s0098g01890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023562	Potato	cytosol	71.45	72.07
Solyc03g083350.2.1	Tomato	cytosol	70.09	70.69
KRH64453	Soybean	cytosol	69.74	69.98
GSMUA_Achr7P14510_001	Banana	cytosol	59.49	68.91
VIT_02s0025g01610.t01	Wine grape	plastid	66.67	66.9
CDX87135	Canola	cytosol	51.79	65.02
Bra029014.1-P	Field mustard	cytosol	15.73	64.79
Bra026464.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.45	64.59
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.28	64.38
AT5G24240.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.91	64.11
GSMUA_Achr9P00160_001	Banana	cytosol	55.38	63.65
Bra009742.1-P	Field mustard	cytosol	62.39	63.59
Bra006947.1-P	Field mustard	cytosol	62.05	63.24
Bra019161.1-P	Field mustard	cytosol	62.05	63.24
CDX88085	Canola	cytosol	62.05	63.24
VIT_15s0046g00440.t01	Wine grape	plastid	62.22	63.19
GSMUA_Achr2P19790_001	Banana	cytosol	58.63	62.82
GSMUA_Achr6P22610_001	Banana	cytosol	54.36	62.72
GSMUA_Achr8P19700_001	Banana	cytosol	53.16	61.95
CDX80424	Canola	cytosol	60.51	61.67
VIT_12s0059g00850.t01	Wine grape	cytosol	9.06	58.89
Os02t0290500-01	Rice	cytosol	56.07	58.05
GSMUA_Achr6P26590_001	Banana	cytosol	53.5	57.54
TraesCS7B01G243500.1	Wheat	cytosol	55.9	57.47
TraesCS7D01G340200.1	Wheat	cytosol	55.9	57.47
EER88404	Sorghum	cytosol, plastid	55.73	57.39
Os06t0340600-02	Rice	cytosol, endoplasmic reticulum	55.73	57.39
Zm00001d037056_P001	Maize	cytosol	55.38	57.04
HORVU7Hr1G081930.1	Barley	cytosol	55.21	56.77
TraesCS7A01G332000.1	Wheat	cytosol	55.21	56.67
Zm00001d046016_P001	Maize	cytosol, plastid	54.7	56.34
VIT_10s0071g00180.t01	Wine grape	extracellular	10.6	55.36
Zm00001d009741_P001	Maize	plastid	52.14	55.15
Os05t0590100-01	Rice	extracellular	55.04	54.95
VIT_10s0071g00170.t01	Wine grape	cytosol, extracellular	11.97	54.69
EES06700	Sorghum	endoplasmic reticulum	51.79	53.91
KXG22662	Sorghum	cytosol	53.5	53.78
Bra012402.1-P	Field mustard	cytosol	58.63	29.52
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	25.3	26.29
VIT_17s0000g04780.t01	Wine grape	cytosol	27.69	25.76
VIT_01s0010g00600.t01	Wine grape	cytosol	27.35	25.48
VIT_14s0083g00880.t01	Wine grape	cytosol	26.32	24.76

Protein Annotations

EntrezGene:100264030	wikigene:100264030	MapMan:27.5.2.3	Gene3D:3.10.20.90	ProteinID:CCB48042	ProteinID:CCB48042.1
UniProt:F6H778	EMBL:FN595247	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR000403	InterPro:IPR000626	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264030	wikigene:LOC100264030	PFAM:PF00240
PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PRINTS:PR00348	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF90
SMART:SM00213	SUPFAM:SSF54236	SUPFAM:SSF56112	TIGR:TC59695	TIGR:TC62265	UniParc:UPI0001985073
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_16s0098g01890	EnsemblPlantsGene:VIT_16s0098g01890	EnsemblPlants:VIT_16s0098g01890.t01
unigene:Vvi.13899	RefSeq:XP_002277933	RefSeq:XP_002277933.1	:	:	:

Description

No Description!

Coordinates

chr16:+:21971524..21974597

Molecular Weight (calculated)

65238.6 Da

IEP (calculated)

5.928

GRAVY (calculated)

-0.248

Length

585 amino acids

Sequence
(BLAST)

001: MSIASVSVSP VCEDSPNFPC YFTDRCGPCL SNSILIYLTV GGSVIPMHVL ESDSIASVKR KIQTFKGSFV KMQKLVFEGR ELARNNSRVQ DYGVTDGNVL
101: HLVLRLSDLQ AITVRSVCGK ELEFQVERSR NVGYVKQQIA KTGKGFFDLK DQELTCDGEE LEDQRLIHDI CKKNDVVIHL LICRSAKVRT KPIKKDFKVS
201: IVASDLSDKR DDVVDKEEYQ WRTQSKEPEV VDRKSLLSDV LLEPLIVNPN IELSSVVKEL ITSTIDGLNR GNQPIRSSEG SGGVYFMQDS SGLKHISVFK
301: PIDEEPMAVN NPHGLPLSMD GEGLKKGTRV GEGALREVAA YILDHPRSGP HSFCNKKGFA GVPPTVMVKC LHGGFNHPEG YEYSPKNIKI GSLQMFMKNQ
401: GSCEDMGPRA FPVDEVHKIT VLDIRLANAD RHAGNILVSK EGEGQLVLIP IDHGYCLPEN FEDCTFDWLY WPQAKIPYSP DTIDYIRSLD AEKDIELLKF
501: HGWNLPLECA RTLRISTMLL KKGAERGLTP FIIGSIMCRE TLKKESVMEQ IVQEAQESVL PGTSEAAFLE AVSMIMDCRL DELSP

Best Arabidopsis Sequence Match ( AT5G24240.2 )
(BLAST)

001: MSVASVALSP ALEELVNFPG IIGRFGFNLD DPILVFLTIA GSVIPKRVME SDSIASVKLR IQSIKGFFVK KQKLLYDGRE VSRNDSQIRD YGLADGKLLH
101: LVIRLSDLQA ISVRTVDGKE FELVVERSRN VGYVKQQIAS KEKELGIPRD HELTLDGEEL DDQRLITDLC QNGDNVIHLL ISKSAKVRAK PVGKDFEVFI
201: EDVNHKHNVD GRRGKNISSE AKPKEFFVEP FIVNPEIKLP ILLKELISST LEGLEKGNGP IRSSDGSGGA YFMQDPSGHK YVSVFKPIDE EPMAVNNPHG
301: QPVSVDGEGL KKGTQVGEGA IREVAAYILD YPMTGPRTFP HDQTGFAGVP PTTMVKCLHK DFNHPNGYSF SPENTKIGSL QMFVSNVGSC EDMGYRVFPV
401: DQVHKISVLD IRLANADRHA GNILVSRDGK DGQMVLTPID HGYCFPNKFE DCTFEWLYWP QAKEPYSSET LEYIKSLDPE KDIELLRFHG WEIPPSCTRV
501: LRISTMLLKK GSAKGLTPFT IGSIMCRETL KEESVIEQII HDAEAIVPTE TTEDEFISTV SAIMDNRLDQ YAWN

Arabidopsis Description

PI4KG3Phosphatidylinositol 4-kinase gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNF8]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.