Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0071g00180.t01 | Wine grape | extracellular | 84.44 | 67.86 |
| VIT_10s0071g00170.t01 | Wine grape | cytosol, extracellular | 86.67 | 60.94 |
| VIT_15s0046g00440.t01 | Wine grape | plastid | 84.44 | 13.19 |
| VIT_16s0098g01890.t01 | Wine grape | cytosol | 58.89 | 9.06 |
| VIT_02s0025g01610.t01 | Wine grape | plastid | 55.56 | 8.58 |
| VIT_17s0000g04780.t01 | Wine grape | cytosol | 12.22 | 1.75 |
| Bra033288.1-P | Field mustard | cytosol | 11.11 | 1.73 |
| VIT_14s0083g00880.t01 | Wine grape | cytosol | 11.11 | 1.61 |
| VIT_08s0040g00680.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 10.0 | 1.6 |
| VIT_01s0010g00600.t01 | Wine grape | cytosol | 10.0 | 1.43 |
| Bra033320.1-P | Field mustard | cytosol | 4.44 | 1.29 |
| CDX89977 | Canola | cytosol | 4.44 | 1.29 |
| CDX90007 | Canola | cytosol | 1.11 | 0.44 |
Protein Annotations
| ArrayExpress:VIT_12s0059g00850 | EMBL:FN595765 | EnsemblPlants:VIT_12s0059g00850.t01 | EnsemblPlantsGene:VIT_12s0059g00850 | InterPro:Ubiquitin-like_domsf | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF180 | ProteinID:CCB51971 | ProteinID:CCB51971.1 | SUPFAM:SSF54236 | UniParc:UPI0002108AB7 | UniProt:F6HIC5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:5665792..5666242
Molecular Weight (calculated)
10280.2 Da
IEP (calculated)
5.075
GRAVY (calculated)
-0.246
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MARSNSLVRD YGVSDGNVFH LVLKLSDLQI INVRTAYGEE FTFHVERSRD VGYVKQQVAK NGKGLVDVED QEIVWDDKWV DGKWVCCSCI
001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPTWWEHFDD
401: QGRKREARFG SYRPWILLA
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPTWWEHFDD
401: QGRKREARFG SYRPWILLA
Arabidopsis Description
PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.