CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
endoplasmic reticulum 3
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0290500-01	Rice	cytosol	72.6	72.21
EER88404	Sorghum	cytosol, plastid	65.3	64.61
GSMUA_Achr7P14510_001	Banana	cytosol	52.85	58.81
Bra029014.1-P	Field mustard	cytosol	14.77	58.45
GSMUA_Achr8P19700_001	Banana	cytosol	50.36	56.37
GSMUA_Achr2P19790_001	Banana	cytosol	53.02	54.58
Bra026464.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.2	54.51
CDX87135	Canola	cytosol	45.2	54.51
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.31	53.43
PGSC0003DMT400023562	Potato	cytosol	53.56	51.9
VIT_16s0098g01890.t01	Wine grape	cytosol	53.91	51.79
Bra009742.1-P	Field mustard	cytosol	52.85	51.74
Solyc03g083350.2.1	Tomato	cytosol	53.02	51.38
Bra006947.1-P	Field mustard	cytosol	52.31	51.22
CDX88085	Canola	cytosol	52.31	51.22
Bra019161.1-P	Field mustard	cytosol	52.31	51.22
AT5G24240.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.31	51.22
CDX80424	Canola	cytosol	51.42	50.35
KRH64453	Soybean	cytosol	52.14	50.26
KXG22662	Sorghum	cytosol	50.36	48.63
EER99049	Sorghum	cytosol, nucleus, plastid	27.94	24.23
EES00556	Sorghum	cytosol	19.75	24.08
Bra012402.1-P	Field mustard	cytosol	48.93	23.67
EES13055	Sorghum	plastid	25.44	22.88
EER89609	Sorghum	cytosol, nucleus, plastid	26.16	22.51

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	EntrezGene:8081636	UniProt:C5Y0H1	EnsemblPlants:EES06700	ProteinID:EES06700
ProteinID:EES06700.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403
InterPro:IPR000626	InterPro:Kinase-like_dom_sf	PFAM:PF00240	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PFscan:PS50053
PANTHER:PTHR10666	PANTHER:PTHR10666:SF144	SMART:SM00213	EnsemblPlantsGene:SORBI_3004G130300	SUPFAM:SSF54236	SUPFAM:SSF56112
unigene:Sbi.20403	UniParc:UPI0001A86000	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	RefSeq:XP_002453724.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:16775995..16779412

Molecular Weight (calculated)

62003.0 Da

IEP (calculated)

5.383

GRAVY (calculated)

-0.116

Length

562 amino acids

Sequence
(BLAST)

001: MSAGVATLEP LQDHLAVVPQ CLLGGLQPLD SILIFLAIPG MPPVPIRVLD SESVASVKLR IQRFKGFVIT KQRLLFGGHE LSHNNSRVRD YGLADGNVLH
101: LVVRLAELHE IVIETAHGKK FRFQVESAHK VGYLKNMIAA QTGEQLESLK DQKLVLGDKE LEDHQLITDI AKKGDVVIHL FINQAAKVQT NNIDKETVVK
201: VVTPKENRNL QIDAMNHIDT NSCKHPTVEP IVVNLKVKLS PVIMEMIGTT IAGLENGYLP VMSAEGSGGV YFMKDNSGES CVAVFKPIDE EPMAENNPRG
301: FPLSVDGEGL KRGTLVGEGA LREVAAYLLD HPTDGCKSDG AEGFSGVPPT ALVRSFHKGK EIKIGSLQMY VQNRGSCEDM GSQAFPVKEV HKIAVLDIRL
401: ANADRHAGNI LVCQDGDHLQ LVPIDHGYCF PEKFEDCTFE WLYWPQAREP FSTETLAYIK SLAGVEDIAL LKFHGWELSP QCARVLQVST MLLKKGAERG
501: LTAYDIGNLM CREVVTRKSE IESLMEEAED YFLPGTSEET FLETLSEIMD GYLDKVLPGQ LR

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.