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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045757_P001 Maize cytosol 91.88 93.46
Os06t0283400-01 Rice plastid 81.93 76.43
TraesCS7A01G213100.1 Wheat plastid 77.03 74.52
TraesCS7B01G119800.1 Wheat plastid 76.42 73.93
TraesCS7D01G215000.1 Wheat plastid 76.26 73.78
HORVU7Hr1G043140.1 Barley plasma membrane 78.1 73.59
GSMUA_Achr10P... Banana cytosol, plastid 49.16 73.29
GSMUA_Achr7P20090_001 Banana cytosol 47.93 70.34
EER99049 Sorghum cytosol, nucleus, plastid 62.63 63.12
EES13055 Sorghum plastid 56.2 58.72
EES00556 Sorghum cytosol 25.73 36.44
EER88404 Sorghum cytosol, plastid 23.74 27.29
EES06700 Sorghum endoplasmic reticulum 22.51 26.16
KXG22662 Sorghum cytosol 23.28 26.12
Protein Annotations
MapMan:27.5.2.3EntrezGene:8073740UniProt:C5Z8M3ncoils:CoilEnsemblPlants:EER89609ProteinID:EER89609
ProteinID:EER89609.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016740InterPro:IPR000403PFAM:PF00454InterPro:PI3/4_kinase_cat_dom
PANTHER:PTHR15245PANTHER:PTHR15245:SF37EnsemblPlantsGene:SORBI_3010G118200UniParc:UPI0001A89A74RefSeq:XP_002438242.1SEG:seg
Description
hypothetical protein
Coordinates
chr10:-:13005711..13009766
Molecular Weight (calculated)
72739.0 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.535
Length
653 amino acids
Sequence
(BLAST)
001: MPRNLESPVQ TQMAVSALDR ALSSEYPTKS RSETKVGGWK RVFVQTDTGC VLAIQLDRGD NAHTVKRRLQ VALNFPTDER SLTLGDRVLK NDLSTIRNDS
101: PLLLTKTFMH RSSSTPCLSP RGKDLQQQKD KGCPIELLVC PSRCSRTRQL VKDVARAIRK GVDPVPIKSG LGGAYYFKNS KGENAAIVKP NDEEPFAPNN
201: PKGFIGKSLG QPGLKRSVRI GETGFREVAA YLLDHDNSAN VPPTLLVKIS HPVFHMNEGA NCANKNIADG STQAVSKIAS FQQFIPHDFD ASDHGTSSFP
301: VSAVHRIGIL DIRIFNTDRH AGNLLVRKQT GAGKFGNQTE LIPIDHGLCL PECLEDPYFE WIHWPQASVP FSEDELEYIA NLDPVKDADM LRMELPMIRE
401: ACLRVLILST IFLKEATAFG LCLAEIGEMM SREFTGMEDQ PSELEFVCME ARRLAAEQED SSTEHDSGEE DLTQFELDSE DHEMLKEPSA HQFEFKTRNS
501: RNQLSKLDEA DEEEEEEEED DTEEVESNAG KLARPKPVNK WLANISKLST SLKGVNLTDK TQRQLSAGPK FVDPANTSKS NSNDTGSQLC NWGSANDMLP
601: TSVSFVKLAD MKPETWGLFL EKFQELLPET FRSRKCSVTA QRAKQRLGTS CQF
Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)
001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF
Arabidopsis Description
PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.