CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74635
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	CDX74635	AT5G35750.1	18642946
AT1G26270.1	CDY47297	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16149	Canola	cytosol, mitochondrion, plastid	95.65	97.7
CDY36079	Canola	cytosol	86.63	87.06
CDY34563	Canola	cytosol	86.31	86.73
AT1G26270.1	Thale cress	cytosol	87.28	86.03
VIT_01s0010g00600.t01	Wine grape	cytosol	69.89	69.11
PGSC0003DMT400050546	Potato	cytosol	68.92	68.15
Solyc05g010810.1.1	Tomato	extracellular	70.05	67.97
PGSC0003DMT400004869	Potato	cytosol	68.12	67.46
Solyc04g005270.1.1	Tomato	cytosol	69.24	67.19
CDX83526	Canola	cytosol	66.02	66.67
CDY48067	Canola	cytosol	66.02	66.56
KRH71011	Soybean	cytosol	68.76	66.41
KRH75169	Soybean	cytosol	68.12	66.2
CDY56175	Canola	cytosol	61.67	62.68
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	59.1	60.66
Zm00001d026559_P001	Maize	plastid	57.81	57.81
EES13055	Sorghum	plastid	57.97	57.6
TraesCS2B01G570500.1	Wheat	peroxisome	57.17	57.44
TraesCS2A01G540100.1	Wheat	peroxisome	57.49	56.49
TraesCS2D01G541800.1	Wheat	peroxisome	57.17	56.44
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	57.0	55.05
CDY14747	Canola	cytosol, peroxisome, plastid	33.98	42.97
CDY06957	Canola	cytosol, peroxisome, plastid	33.66	42.57
CDY35435	Canola	cytosol, extracellular, vacuole	33.82	39.7
CDY22484	Canola	cytosol, extracellular, vacuole	33.66	39.51
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	35.59	39.32
CDX83360	Canola	cytosol	17.07	33.76
CDY27320	Canola	cytosol	24.48	31.08
CDY46532	Canola	cytosol	23.03	30.95
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.87	30.47
CDX87135	Canola	cytosol	22.71	30.26
CDY64881	Canola	cytosol	23.83	30.08
CDY08380	Canola	cytosol	24.8	29.56
CDY47844	Canola	plastid	24.48	29.12
CDY66313	Canola	cytosol	25.12	28.31
CDX88085	Canola	cytosol	25.28	27.35
CDX89977	Canola	cytosol	13.53	27.01
CDX95703	Canola	cytosol	21.42	26.81
CDX80424	Canola	cytosol	24.64	26.66
CDX90007	Canola	cytosol	8.86	24.44
CDY27202	Canola	plasma membrane	36.72	21.69

Protein Annotations

EnsemblPlants:CDX85013	EnsemblPlantsGene:GSBRNA2T00142442001	GO:A0A078DCK5	InterPro:IPR000403	InterPro:PI3/4_kinase_cat_dom	InterPro:Ubiquitin-like_domsf
ncoils:Coil	PANTHER:PTHR15245	PANTHER:PTHR15245:SF37	PFAM:PF00454	ProteinID:CDX85013	ProteinID:CDX85013.1
SEG:seg	SUPFAM:SSF54236	UniParc:UPI0004EF30C5	MapMan:27.5.2.3	:	:

Description

BnaC05g20420D

Coordinates

chrLK031839:-:1495481..1498384

Molecular Weight (calculated)

68905.4 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.327

Length

621 amino acids

Sequence
(BLAST)

001: MSRKLNSLIQ THMAVSLLKS PLTGEFYEFN KMGMKPPVGR RRVFVQTETG CVLGLELDRS DNAHTVKRKL QVALNFPTDE SSLTFGDLVL NNDLTSVRND
101: SPLLLTRNNF HRSSSTPCLS PMRADLQHGR DESSSIEILG NSVCSSFVRQ MAKDITKALK RGIDPVAVNS GLGGVYFFKN SRGDSVAIVK PTDEEPFAPN
201: NPKGFVGKAL GQPGLKRSVR VGETGYREVA AYLLDKDGFA NVPPTALVKI SHSIFNVNNG VKASKRMEKV LVSKIASLQQ FISHDYDASE HGTSSFPVSA
301: VHRIGILDIR ILNTDRHSGN LLVRNRKLDG VGMFGQVELI PIDHGLCLPE TLEDPYFEWI HWPQASIPFS EDELKYIANL DPFKDCEMLR RELPMVREAS
401: LRVLVLCTIL LKEAAAYGLC LAEIGEMMTR EVRAGDEEPS EIEVVCLEAR SLVGEKEAES PRSDLGGDVE FQFDLDCEEN ITSPLGFTLG NARSHLSKVE
501: ETTEEEEEEK EVNEIAIPEK MAAVSKLSMS LKSTLLGEKS QKYQKHPGAR AESGYASSGH RSAEEQIPAS TSFVKLSDMS EEEWKIFLEK YQELLCPAFA
601: KRKAITLGQN LRQRLGTSCQ F

Best Arabidopsis Sequence Match ( AT1G26270.1 )
(BLAST)

001: MSRKLDSPIK TQMAVALVKS PLNGEFREFN KVGMKTPVGR RRVFVQTETG CVLGLELDRS DNAHTVKRKL QVALNFPIEE SSLTFGDLVL KNDLTAVRSD
101: SPLLLTRNNF HRSSSTPCLS PMRADLQQRR DESSPIEILG NSVSFSFVRQ MAKDITKAVK KGIDPVAVNS GLGGAYYFKN SRGESVAIVK PTDEEPYAPN
201: NPKGFVGKAL GQPGLKRSVR VGETGYREVA AYLLDKEHFA NVPPTALVKI THSIFNVNDG VKASKPMEKM LVSKIASLQQ FIPHDYDASE HGTSNFPVSA
301: VHRIGILDIR ILNTDRHSGN LLVKKLDGDG MFGQVELVPI DHGLCLPETL EDPYFEWIHW PQASIPFSED ELKYIANLDP LGDCEMLRRE LPMVREASLR
401: VLVLCTIFLK EAAANGLCLA EIGEMMTREV RPGDEEPSEI EVVCLEAMSL IGEKDAESPR SDLGNDIEFQ FDIDCEEVTD CTKKLALPLG LTFGNARGQL
501: SKVEETTEDG EEEEEEDREE EENDRADLEK MPTIKLSMSL KSTLLGEKSQ KYQKHPGARV ESAYASSAHR SADEQIPSST SFVKLSDMSE EEWTIFLEKY
601: QELLYPAIEK RKSITLGQKQ RQRLGTSCQF

Arabidopsis Description

PI4KG5Phosphatidylinositol 4-kinase gamma 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C671]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.