CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039280.1-P	Field mustard	cytosol, nucleus, plastid	57.35	98.75
CDY27320	Canola	cytosol	87.3	98.36
AT2G46500.1	Thale cress	cytosol	85.48	83.22
CDX83360	Canola	cytosol	46.28	81.21
CDX95703	Canola	cytosol	63.7	70.77
CDX87135	Canola	cytosol	49.18	58.15
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.0	57.94
CDY46532	Canola	cytosol	48.09	57.36
CDY47844	Canola	plastid	53.9	56.9
CDY08380	Canola	cytosol	53.36	56.43
CDY64881	Canola	cytosol	50.09	56.1
CDX88085	Canola	cytosol	56.81	54.53
CDX80424	Canola	cytosol	55.35	53.14
CDX89977	Canola	cytosol	15.97	28.3
CDY06957	Canola	cytosol, peroxisome, plastid	23.77	26.68
CDY14747	Canola	cytosol, peroxisome, plastid	23.59	26.48
CDY56175	Canola	cytosol	29.22	26.35
CDX83526	Canola	cytosol	28.86	25.85
CDY48067	Canola	cytosol	28.86	25.81
CDY16149	Canola	cytosol, mitochondrion, plastid	28.31	25.66
CDX85013	Canola	mitochondrion	28.31	25.12
CDY36079	Canola	cytosol	27.95	24.92
CDY34563	Canola	cytosol	27.95	24.92
CDY35435	Canola	cytosol, extracellular, vacuole	23.05	24.01
CDY22484	Canola	cytosol, extracellular, vacuole	23.05	24.01
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	24.32	23.84
CDX90007	Canola	cytosol	8.35	20.44
CDY27202	Canola	plasma membrane	25.41	13.32

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	GO:A0A078JFH0	UniProt:A0A078JFH0	EnsemblPlants:CDY66313	ProteinID:CDY66313
ProteinID:CDY66313.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00053353001
InterPro:IPR000403	InterPro:IPR000626	InterPro:Kinase-like_dom_sf	PFAM:PF00240	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom
PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF180	SMART:SM00213	SUPFAM:SSF54236	SUPFAM:SSF56112
UniParc:UPI0004EDEDA9	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:

Description

BnaA04g29680DBnaA04g29680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFH0]

Coordinates

chrLK035191:+:4496..6715

Molecular Weight (calculated)

60930.2 Da

IEP (calculated)

6.634

GRAVY (calculated)

-0.346

Length

551 amino acids

Sequence
(BLAST)

001: MSSAGVTLSP VRNEPPLLMP LARADSLPEE TILVYLTLPG SVIPMRVLES DSIESVKLRI QSYRGFVVRN QKLVFGGREL ARSGSNMREY GVTEGNVLHL
101: VVKVSDLQVL DVKTACGKHC RFHVERGRNI GYVKKQVSKR KGGDFVDSEI LYEGERLEDQ SVIDDICRNG DSVLHLVLRR SAKVRAKPVD KSFELSIVAP
201: TQTSVVPQRK EFSLEPLVVN PKAKLSLVVK DMVSSASDGL RSGNPPVRSR EGTGGAYFMQ GSSGNKYVGV FKPIDEEPTA ENNPHGLPLS PNGEGLKKGT
301: KVGEGAFREV AAYLLDHPKS GEERGFAGVP PTTMVECLHP GFNHPKGVKT KIGSLQMFTE NDGSCEDMGP ASFPVEEVHK ISVLDIRLAN ADRHGGNILM
401: SKDKEGKIVL VPIDHGYCLP ESFEDCTFEW LYWSQARKPY SRETLDYIRS LDAEEDINLL KFHGWKMPSK TARTLRISTM LLKKGAERGL TAFEIGNMMC
501: RETLSKKSLV EEMVEEAQEA VLPGTSEAAF LEALSDVMDY HLDEVVRSQE H

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.