CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35435	Canola	cytosol, extracellular, vacuole	98.11	98.11
CDY06957	Canola	cytosol, peroxisome, plastid	82.42	88.8
CDY14747	Canola	cytosol, peroxisome, plastid	82.23	88.59
AT2G40850.1	Thale cress	cytosol, extracellular, plasma membrane	87.52	82.53
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	63.89	60.14
KRG95041	Soybean	cytosol, plastid	46.69	53.35
KRH66669	Soybean	mitochondrion	47.07	51.98
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	50.85	47.78
TraesCS3B01G215600.1	Wheat	plastid	36.48	46.62
TraesCS3D01G190000.1	Wheat	cytosol, plastid	36.29	46.38
TraesCS3A01G186000.1	Wheat	plastid	36.29	46.38
HORVU3Hr1G038320.1	Barley	plastid	35.73	45.43
Solyc10g078170.1.1	Tomato	cytosol, plastid	47.07	43.99
PGSC0003DMT400018507	Potato	cytosol, plastid	47.07	43.99
GSMUA_Achr5P27480_001	Banana	plastid	39.32	43.79
Zm00001d008265_P001	Maize	cytosol	35.73	42.66
EES00556	Sorghum	cytosol	36.29	41.65
Zm00001d040398_P001	Maize	plastid	36.29	38.87
Os01t0270700-00	Rice	mitochondrion	31.95	37.72
CDY48067	Canola	cytosol	40.83	35.06
CDX83526	Canola	cytosol	40.45	34.8
CDY56175	Canola	cytosol	39.32	34.04
CDY16149	Canola	cytosol, mitochondrion, plastid	38.94	33.88
CDX85013	Canola	mitochondrion	39.51	33.66
CDY34563	Canola	cytosol	38.75	33.17
CDY36079	Canola	cytosol	38.75	33.17
CDY27202	Canola	plasma membrane	64.65	32.54
CDX83360	Canola	cytosol	17.2	28.98
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.39	27.68
CDX87135	Canola	cytosol	23.82	27.04
CDY46532	Canola	cytosol	23.25	26.62
CDY27320	Canola	cytosol	23.44	25.36
CDY64881	Canola	cytosol	23.44	25.2
CDY08380	Canola	cytosol	24.39	24.76
CDX89977	Canola	cytosol	14.56	24.76
CDY47844	Canola	plastid	24.2	24.52
CDY66313	Canola	cytosol	24.01	23.05
CDX95703	Canola	cytosol	21.55	22.98
CDX80424	Canola	cytosol	24.57	22.65
CDX88085	Canola	cytosol	24.2	22.3
CDX90007	Canola	cytosol	9.26	21.78

Protein Annotations

EnsemblPlants:CDY22484	EnsemblPlantsGene:GSBRNA2T00019044001	GO:A0A078GAS6	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403
InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245	PANTHER:PTHR15245:SF23	PFAM:PF00454	ProteinID:CDY22484	ProteinID:CDY22484.1
SEG:seg	UniParc:UPI0004EB38B6	UniProt:A0A078GAS6	MapMan:27.5.2.3	:	:

Description

BnaC03g22940DBnaC03g22940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAS6]

Coordinates

chrLK032132:+:114038..116037

Molecular Weight (calculated)

57579.1 Da

IEP (calculated)

5.340

GRAVY (calculated)

-0.066

Length

529 amino acids

Sequence
(BLAST)

001: MNCLATTLII TCKTTLISDM AVAIDPFSDQ FPYFNRSSQR CRLLSLTNLD FNFLGSSLAQ SLNGMSQDDN IHRSVSSPCF SIAASANMEE DKKATGAPRI
101: EILGGQSVPT VRALVAEVTM AIVSGAQPLL LPSGLGGAYL LQTGKGHNIA VAKPVDEEPL ALNNPKKSGS LMLGQPGMKH SIPVGETGIR ELAAYLLDYQ
201: GFSNVPPTAL VSISHVPFHV SDAFSFSSFP YKVASLQRFV CHDFDAGELG PGSFTVTSVH RIGILDVRVL NLDRHAGNML VKSCDQDERY NRLGIAELVP
301: IDHGLCLPEC LDDPYFEWLN WPQALVPFTD TELQYISDLD PFKDAELLRN ELQSLPESAI RVLIVCTVFL KQAAAAGLCL AEIGEKMTRD FSRGEDSFSL
401: LETLCTKAKA TVVVDKGNEV NAELECEVEI TEVFHVSKPP LAPKGPRANS IPASMLSSQN QRITVNAKEK KRGGTMKSRS PPMRVNHAES EGVSFGDMTT
501: VEWDMFLQSF QTLLQDALSK GPVPRLGKQ

Best Arabidopsis Sequence Match ( AT2G40850.1 )
(BLAST)

001: MNCLATTIII TCKPTLISDM AVAIDPFSDK FPYFNRSSQR CRLQSLTNLD FNFLAQSFNH TFEDDNIHRS VSSPCFSIAA SANMEEDLKA TTAPRIEILG
101: GQRVPTVRAL VAEVTMAMVS GAQPLLLPSG MGGAYLLQTG KGHNIAVAKP VDEEPLAFNN PKKSGNLMLG QPGMKHSIPV GETGIRELAA YLLDYQGFSG
201: VPPTALVSIS HVPFHVSDAF SFSSMPYKVA SLQRFVGHDF DAGELGPGSF TATSVHRIGI LDVRLLNLDR HAGNMLVKRC DKKEAYNRLG TAELVPIDHG
301: LCLPECLDDP YFEWLNWPQA LVPFSDTELD YISNLDPFKD AELLRTELHS LPESAIRVLV VCTVFLKQAA AAGLCLAEIG EKMTRDFSKG EESFSLLETL
401: CTKAKASVFG KTSEDSDYSH EGNEVNTELQ CGMFKFDGGD TPCEAEISEV FHVSKPPLVP RGPRANTIPN DVTASMSSSQ NQRITHQEKS AKEKKRGGKQ
501: ERCTVRSKSP PISPNHDESK GVSFVDMTTV EWDTFLQSFQ TLLQDALSKG STPRLGCSCE I

Arabidopsis Description

PI4KG1Phosphatidylinositol 4-kinase gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O22199]
SUBAcon: [plasma membrane,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.