CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G13640.1	Thale cress	cytosol	84.78	83.28
CDX83526	Canola	cytosol	73.32	72.85
CDY48067	Canola	cytosol	73.32	72.73
VIT_01s0010g00600.t01	Wine grape	cytosol	68.9	67.04
PGSC0003DMT400050546	Potato	cytosol	68.25	66.4
Solyc05g010810.1.1	Tomato	extracellular	68.25	65.16
PGSC0003DMT400004869	Potato	cytosol	66.12	64.43
Solyc04g005270.1.1	Tomato	cytosol	65.96	62.97
CDY34563	Canola	cytosol	63.5	62.78
CDY36079	Canola	cytosol	63.18	62.46
CDY16149	Canola	cytosol, mitochondrion, plastid	61.87	62.17
CDX85013	Canola	mitochondrion	62.68	61.67
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	57.12	57.69
Zm00001d026559_P001	Maize	plastid	57.28	56.36
TraesCS2B01G570500.1	Wheat	peroxisome	56.96	56.31
EES13055	Sorghum	plastid	56.96	55.68
TraesCS2D01G541800.1	Wheat	peroxisome	57.12	55.48
TraesCS2A01G540100.1	Wheat	peroxisome	57.12	55.22
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	57.12	54.28
CDY14747	Canola	cytosol, peroxisome, plastid	33.55	41.75
CDY06957	Canola	cytosol, peroxisome, plastid	33.22	41.34
CDY22484	Canola	cytosol, extracellular, vacuole	34.04	39.32
CDY35435	Canola	cytosol, extracellular, vacuole	34.04	39.32
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	35.02	38.08
CDX83360	Canola	cytosol	17.35	33.76
CDY46532	Canola	cytosol	25.04	33.12
CDY27320	Canola	cytosol	25.7	32.11
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.9	31.33
CDX87135	Canola	cytosol	23.9	31.33
CDY64881	Canola	cytosol	25.2	31.3
CDY08380	Canola	cytosol	25.37	29.75
CDY47844	Canola	plastid	25.2	29.5
CDY66313	Canola	cytosol	26.35	29.22
CDX88085	Canola	cytosol	26.51	28.22
CDX80424	Canola	cytosol	26.51	28.22
CDX95703	Canola	cytosol	21.44	26.41
CDX90007	Canola	cytosol	9.17	24.89
CDX89977	Canola	cytosol	12.6	24.76
CDY27202	Canola	plasma membrane	35.84	20.84

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	GO:A0A078J229	UniProt:A0A078J229	EnsemblPlants:CDY56175	ProteinID:CDY56175
ProteinID:CDY56175.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00017949001	InterPro:IPR000403	PFAM:PF00454
InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245	PANTHER:PTHR15245:SF11	SUPFAM:SSF54236	UniParc:UPI0004EF464C	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

BnaC05g49350DPhosphatidylinositol 4-kinase gamma 6 [Source:Projected from Arabidopsis thaliana (AT1G13640) UniProtKB/Swiss-Prot;Acc:Q8W4R8]

Coordinates

chrLK033466:+:15629..18243

Molecular Weight (calculated)

68165.3 Da

IEP (calculated)

5.714

GRAVY (calculated)

-0.338

Length

611 amino acids

Sequence
(BLAST)

001: MAMAVFKSPI KGEFHGSRNM ESKEFKHHHL LHRHSSGRRR VFVQTETGCV LGMDLDRSDN VHTVKKRLQI AFNLPTEESS LTFGDMVLKN DDLSAVRNDS
101: PLLLKRNLMH RSSSTPCLSP TGSDLQRKDL SAPIEILSHS RCFLSLKQTA NDIVEAMKAG VEPIPVNGGM GGAYYFRNEK GQSVAIVKPT DEEPFAPNNP
201: KGFTGKSLGD PGLKPSVRVG ETGYREVAAY LLDHDHFANV PPTALVKITH TVFNVNDGVN GNRSREKKKL VSSKIASFQK FVAHDFDASD HGTSSFPVAS
301: VHRIGILDIR ILNTDRHGGN LLVKKPDGRF GQVELIPIDH GLCLPETLED PYFEWIHWPQ ASIPFSEEEL DYILSLDPVK DCEMLRRELP MIREACLRVL
401: ALCTVFLKEA AAYGLCLAEI GEMMTREFHA GGEVPSVLEM LGIEAKRLIA EGDILSLRSD VEGETEFQFD LDYSDLDSVY SSKTQTLIVK NPFSNGRSSL
501: GKLEEEEEDE TEEEAGLALS LSELSTLTKD NKMGSMYLNT PRDETEKTLS SHKSANVLLP VSTNFVKLAD MIEAEWVVFL EKFQELLDSA FAERRTMTLR
601: SRQRLGTSCQ F

Best Arabidopsis Sequence Match ( AT1G13640.2 )
(BLAST)

001: MAMAVFKAPL KGEFHGARKM EGKQYKHHLL QQQSTGRRRV FVQTDTGCVL GVELDRNDNV HTVKKRLQIA FNFPTEESSL TFGDMVLKND LSAVRNDSPL
101: LLKRNLMHRS SSTPCLSPTG NDLQRKDRSG PIEILSHSPC FLSLKQTAND IVKAMKMGVE PIPVNGGLGG AYYFRDEKGQ SVAIVKPTDE EPFAPNNPKG
201: FVGKALGQPG LKPSVRVGET GFREVAAYLL DYDHFANVPP TALVKITHSV FNVNDGMDGN KSREKKKLVS SKIASFQKFV PHDFDASDHG TSSFPVASVH
301: RIGILDIRIL NTDRHGGNLL VKKLDDGGVG RFGQVELIPI DHGLCLPETL EDPYFEWIHW PQASIPFSEE ELDYIQSLDP VKDCEMLRRE LPMIREACLR
401: VLVLCTVFLK EAAVFGLCLA EIGEMMTREF RAGEEEPSEL EMLCIEAKRL TTEQDVLSPK SDGEGETEFQ FDIDYNELDS VYGSETETDE FFAKNPFSNG
501: RSSLGELKES IAEEEEDDEE EAKLTLSLSK LSTSMKNNLS NTMGSGYLKP PKDNQTDKAL VSHKSANVQL PLSVNFVKLA DMKEVEWVVF LERFQELLYS
601: AFAERKTMTL RNTQRLGTSC KF

Arabidopsis Description

PI4KG6Phosphatidylinositol 4-kinase gamma 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4R8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.