Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039280.1-P | Field mustard | cytosol, nucleus, plastid | 64.62 | 98.75 |
| CDY66313 | Canola | cytosol | 98.36 | 87.3 |
| CDX83360 | Canola | cytosol | 49.69 | 77.39 |
| AT2G46500.1 | Thale cress | cytosol | 85.28 | 73.67 |
| CDX95703 | Canola | cytosol | 68.51 | 67.54 |
| CDY46532 | Canola | cytosol | 51.33 | 54.33 |
| CDY64881 | Canola | cytosol | 53.78 | 53.46 |
| CDY47844 | Canola | plastid | 56.85 | 53.26 |
| CDY08380 | Canola | cytosol | 56.03 | 52.59 |
| CDX87135 | Canola | cytosol | 49.69 | 52.15 |
| CDY19844 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.49 | 51.93 |
| CDX88085 | Canola | cytosol | 58.49 | 49.83 |
| CDX80424 | Canola | cytosol | 56.85 | 48.43 |
| CDX89977 | Canola | cytosol | 17.38 | 27.33 |
| CDY06957 | Canola | cytosol, peroxisome, plastid | 25.97 | 25.87 |
| CDY56175 | Canola | cytosol | 32.11 | 25.7 |
| CDY14747 | Canola | cytosol, peroxisome, plastid | 25.77 | 25.66 |
| CDX83526 | Canola | cytosol | 31.49 | 25.04 |
| CDY16149 | Canola | cytosol, mitochondrion, plastid | 31.08 | 25.0 |
| CDY48067 | Canola | cytosol | 31.49 | 25.0 |
| CDX85013 | Canola | mitochondrion | 31.08 | 24.48 |
| CDY34563 | Canola | cytosol | 30.47 | 24.11 |
| CDY36079 | Canola | cytosol | 30.47 | 24.11 |
| CDY22484 | Canola | cytosol, extracellular, vacuole | 25.36 | 23.44 |
| CDY35435 | Canola | cytosol, extracellular, vacuole | 25.36 | 23.44 |
| CDX72124 | Canola | mitochondrion, peroxisome, plasma membrane, vacuole | 26.18 | 22.78 |
| CDX90007 | Canola | cytosol | 9.2 | 20.0 |
| CDY27202 | Canola | plasma membrane | 26.79 | 12.46 |
Protein Annotations
| MapMan:27.5.2.3 | Gene3D:3.10.20.90 | GO:A0A078GL49 | UniProt:A0A078GL49 | EnsemblPlants:CDY27320 | ProteinID:CDY27320 |
| ProteinID:CDY27320.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00037256001 |
| InterPro:IPR000403 | InterPro:IPR000626 | InterPro:Kinase-like_dom_sf | PFAM:PF00240 | PFAM:PF00454 | InterPro:PI3/4_kinase_cat_dom |
| PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF180 | SUPFAM:SSF54236 | SUPFAM:SSF56112 | UniParc:UPI0004EEEBA5 |
| InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : | : | : |
Description
BnaC04g50850DBnaC04g50850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GL49]
Coordinates
chrLK032203:+:66226..68233
Molecular Weight (calculated)
54004.7 Da
IEP (calculated)
6.751
GRAVY (calculated)
-0.389
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAGVTLSP KLVFGGRELA RSGSNMREYG VTEGNVLHLV VKVSDLQALD VKTACGKHCR FHVERGRNIG YVKKQISKRK GGDFVDSEIL YEGERLEDQS
101: VIDDICRNGD SVLHLVLRRS AKVRAKPVDK SFELSIVAPQ TSVVPQRKEF SLEPLVVNPK AKLSLVVKDM VSSASDGLRS GNPPVRSREG TGGAYFMQAS
201: SGNKYVGVFK PIDEEPTAEN NPHGLPLSPN GEGLKKGTKV GEGAFREVAA YLLDHPKNGE ERGYAGVPPT VMVECLHPGF NHPKGVKTKI GSLQMFTEND
301: GSCEDMGPAS FPVEEVHKIS VLDIRLANAD RHGGNILMSK DKEGKIVLVP IDHGYCLPES FEDCTFEWLY WSQARKPYSR ETLDYIRSLN AEEDINLLKF
401: HGWKMPLKTA RTLRISTMLL KKGAERGLTA FEIGNMMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DEVVRSQEH
101: VIDDICRNGD SVLHLVLRRS AKVRAKPVDK SFELSIVAPQ TSVVPQRKEF SLEPLVVNPK AKLSLVVKDM VSSASDGLRS GNPPVRSREG TGGAYFMQAS
201: SGNKYVGVFK PIDEEPTAEN NPHGLPLSPN GEGLKKGTKV GEGAFREVAA YLLDHPKNGE ERGYAGVPPT VMVECLHPGF NHPKGVKTKI GSLQMFTEND
301: GSCEDMGPAS FPVEEVHKIS VLDIRLANAD RHGGNILMSK DKEGKIVLVP IDHGYCLPES FEDCTFEWLY WSQARKPYSR ETLDYIRSLN AEEDINLLKF
401: HGWKMPLKTA RTLRISTMLL KKGAERGLTA FEIGNMMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DEVVRSQEH
001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH
Arabidopsis Description
PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.