CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74635
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	CDX74635	AT5G35750.1	18642946
AT1G26270.1	CDY47297	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36079	Canola	cytosol	96.44	96.44
CDY16149	Canola	cytosol, mitochondrion, plastid	85.92	87.34
CDX85013	Canola	mitochondrion	86.73	86.31
AT1G26270.1	Thale cress	cytosol	82.69	81.11
VIT_01s0010g00600.t01	Wine grape	cytosol	69.74	68.63
Solyc05g010810.1.1	Tomato	extracellular	70.87	68.44
PGSC0003DMT400050546	Potato	cytosol	69.26	68.15
CDY48067	Canola	cytosol	66.99	67.21
CDX83526	Canola	cytosol	66.02	66.34
KRH75169	Soybean	cytosol	67.96	65.73
KRH71011	Soybean	cytosol	68.28	65.63
Solyc04g005270.1.1	Tomato	cytosol	67.96	65.62
PGSC0003DMT400004869	Potato	cytosol	66.5	65.55
CDY56175	Canola	cytosol	62.78	63.5
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	58.25	59.5
TraesCS2B01G570500.1	Wheat	peroxisome	56.8	56.8
Zm00001d026559_P001	Maize	plastid	56.96	56.68
EES13055	Sorghum	plastid	57.28	56.64
TraesCS2A01G540100.1	Wheat	peroxisome	57.12	55.85
TraesCS2D01G541800.1	Wheat	peroxisome	56.8	55.8
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	56.47	54.28
CDY14747	Canola	cytosol, peroxisome, plastid	33.5	42.16
CDY06957	Canola	cytosol, peroxisome, plastid	33.5	42.16
CDY35435	Canola	cytosol, extracellular, vacuole	33.33	38.94
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	35.28	38.79
CDY22484	Canola	cytosol, extracellular, vacuole	33.17	38.75
CDX83360	Canola	cytosol	17.48	34.39
CDY27320	Canola	cytosol	24.11	30.47
CDY46532	Canola	cytosol	22.49	30.09
CDX87135	Canola	cytosol	22.65	30.04
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.49	29.83
CDY64881	Canola	cytosol	23.14	29.07
CDY08380	Canola	cytosol	24.27	28.79
CDY47844	Canola	plastid	24.11	28.54
CDY66313	Canola	cytosol	24.92	27.95
CDX89977	Canola	cytosol	13.59	27.01
CDX88085	Canola	cytosol	24.92	26.83
CDX95703	Canola	cytosol	21.52	26.81
CDX80424	Canola	cytosol	24.76	26.66
CDX90007	Canola	cytosol	8.58	23.56
CDY27202	Canola	plasma membrane	36.25	21.31

Protein Annotations

EnsemblPlants:CDY34563	EnsemblPlantsGene:GSBRNA2T00056988001	GO:A0A078HCR6	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403
InterPro:PI3/4_kinase_cat_dom	ncoils:Coil	PANTHER:PTHR15245	PANTHER:PTHR15245:SF37	PFAM:PF00454	ProteinID:CDY34563
ProteinID:CDY34563.1	SEG:seg	UniParc:UPI0004EEEEEF	UniProt:A0A078HCR6	MapMan:27.5.2.3	:

Description

BnaC03g56630DBnaC03g56630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCR6]

Coordinates

chrLK032337:-:112679..115329

Molecular Weight (calculated)

68763.9 Da

IEP (calculated)

5.227

GRAVY (calculated)

-0.352

Length

618 amino acids

Sequence
(BLAST)

001: MSRKLDSPIQ TQMAVSVLKS PLTGEFHEFN KVGLGINSPV VGRRRVFVQT DTGCVLGLDL DRSDNAHTVK RKLQVALHFP TDESSLTFGD LVLKNDLTAV
101: RSDSPLLLTR NSFHRSSSTP CLSPMRRGGD VQQHRDESGS IEILGNSVCL RQVVKDITKA LKRDVEPVSV HSGLGGVYFF KNVRGESVAI VKPTDEEPFA
201: PNNPKGFVGK ALGQPGLKRS VRVGETGYRE VAAYLLDKDG FAKVPPTALV KISHSIFNVN NGVKGGSKRM EKMLVSKIAS LQQFIAHDYD ASEHGTSSFP
301: VSSVHRVGIL DIRILNTDRH SGNLLVRKLD GVGMFGQVEL IPIDHGLSLP ETLEDPYFEW IHWPQASIPF SEEELKYIAS LDPFEDCEML RRELPMVREA
401: SLRVLVLCTV LLKEAAAYGL CLAEIGEMMT REVRPGDEEP SEIEVVCLEA RSLIGEKEAE SPRSDLGGEV EFQFDLDCEE AFTLGFTRSH LPKVEETTEE
501: EDDEEEEEED IKEKEGKVQA ITKLSMSLKT TFLGEKSQKY QKHPGVRAES AYASSAHRSA EEQIPASTSF VNLADMSEEE WTMFLEKYQE LLYPAFAKRK
601: AITLGQNLRQ RLGTSCQF

Best Arabidopsis Sequence Match ( AT1G26270.1 )
(BLAST)

001: MSRKLDSPIK TQMAVALVKS PLNGEFREFN KVGMKTPVGR RRVFVQTETG CVLGLELDRS DNAHTVKRKL QVALNFPIEE SSLTFGDLVL KNDLTAVRSD
101: SPLLLTRNNF HRSSSTPCLS PMRADLQQRR DESSPIEILG NSVSFSFVRQ MAKDITKAVK KGIDPVAVNS GLGGAYYFKN SRGESVAIVK PTDEEPYAPN
201: NPKGFVGKAL GQPGLKRSVR VGETGYREVA AYLLDKEHFA NVPPTALVKI THSIFNVNDG VKASKPMEKM LVSKIASLQQ FIPHDYDASE HGTSNFPVSA
301: VHRIGILDIR ILNTDRHSGN LLVKKLDGDG MFGQVELVPI DHGLCLPETL EDPYFEWIHW PQASIPFSED ELKYIANLDP LGDCEMLRRE LPMVREASLR
401: VLVLCTIFLK EAAANGLCLA EIGEMMTREV RPGDEEPSEI EVVCLEAMSL IGEKDAESPR SDLGNDIEFQ FDIDCEEVTD CTKKLALPLG LTFGNARGQL
501: SKVEETTEDG EEEEEEDREE EENDRADLEK MPTIKLSMSL KSTLLGEKSQ KYQKHPGARV ESAYASSAHR SADEQIPSST SFVKLSDMSE EEWTIFLEKY
601: QELLYPAIEK RKSITLGQKQ RQRLGTSCQF

Arabidopsis Description

PI4KG5Phosphatidylinositol 4-kinase gamma 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C671]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.