CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH14106
KRH74010

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	KRH14106	AT5G35750.1	18642946
AT1G26270.1	KRH74010	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71011	Soybean	cytosol	97.18	96.58
VIT_01s0010g00600.t01	Wine grape	cytosol	73.87	75.16
Solyc05g010810.1.1	Tomato	extracellular	74.49	74.38
PGSC0003DMT400050546	Potato	cytosol	72.93	74.2
Solyc04g005270.1.1	Tomato	cytosol	72.61	72.5
PGSC0003DMT400004869	Potato	cytosol	70.74	72.09
AT1G26270.1	Thale cress	cytosol	68.08	69.05
CDY16149	Canola	cytosol, mitochondrion, plastid	65.41	68.75
Bra024724.1-P	Field mustard	plastid	66.35	68.39
Bra011020.1-P	Field mustard	cytosol	65.88	68.12
CDY36079	Canola	cytosol	65.88	68.12
CDX85013	Canola	mitochondrion	66.2	68.12
CDY34563	Canola	cytosol	65.73	67.96
KRH45131	Soybean	cytosol	64.95	65.05
KRH01418	Soybean	cytosol	64.16	64.26
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	59.78	63.14
TraesCS2B01G570500.1	Wheat	peroxisome	59.0	61.0
EES13055	Sorghum	plastid	59.15	60.48
Zm00001d026559_P001	Maize	plastid	58.69	60.39
TraesCS2A01G540100.1	Wheat	peroxisome	59.31	59.97
TraesCS2D01G541800.1	Wheat	peroxisome	59.0	59.94
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	58.53	58.16
KRG95041	Soybean	cytosol, plastid	32.71	45.14
KRH66669	Soybean	mitochondrion	33.33	44.47
KRH27827	Soybean	extracellular	7.36	29.94
KRH60051	Soybean	cytosol	25.67	28.87
KRH41324	Soybean	cytosol	25.51	28.65
KRH77661	Soybean	nucleus	24.57	27.59
KRH68915	Soybean	cytosol, nucleus, peroxisome, plastid	24.26	25.79
KRG97187	Soybean	cytosol, peroxisome, plastid	23.32	25.34
KRH64453	Soybean	cytosol	23.0	25.21
KRH06459	Soybean	cytosol	23.16	25.08
KRH47902	Soybean	cytosol	23.16	24.92

Protein Annotations

EntrezGene:100776828	MapMan:27.5.2.3	EMBL:ACUP02000138	EnsemblPlantsGene:GLYMA_01G067000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
UniProt:I1J666	InterPro:IPR000403	EnsemblPlants:KRH75169	ProteinID:KRH75169	ProteinID:KRH75169.1	PFAM:PF00454
InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245	PANTHER:PTHR15245:SF11	SUPFAM:SSF54236	UniParc:UPI00023375CC	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:10810387..10813383

Molecular Weight (calculated)

71562.2 Da

IEP (calculated)

5.220

GRAVY (calculated)

-0.427

Length

639 amino acids

Sequence
(BLAST)

001: MSRKLDSPVQ TQMAVAVIRS SPLGREYHGK QPAGRRRVFV QTEKGCVLGM DLDRGDNVHT VKRRLQLALN VPVDESYLTF GDMVFKNDLS AVRNDTPLLL
101: TRGKNNLMPR SSSTPCLSPK GRDIDKSGPI EILGQSNRLD GIKHMIKDIM KAIKMGIEPI PVHSGLGGAY YFRNSKGESV AIVKPTDEEP FAPNNPKGFV
201: GKALGQPGLK RSVRVGETGF REVAAYLLDY DHFANVPPTA LVKITHSVFN VNDGVNGNNL WRKRLFSKIA SFQQFIPHDF DASDHGTSSF PVASVHRIGI
301: LDIRILNTDR HAGNLLVRKL DGIGSFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASIP FSEDELAYIE DLDPYRDCEM LRMELPMIRE ACLRVLVLCT
401: IFLKEAAAYG LCLAEIGEMM TREFRRGEEE PSELEVVCLE ARKIVAERDR EELSPGAEMR DDEFLFDIDY YDEVGSDFTP KMAIDDPLTR ATFQPALGNG
501: HARNPLSKLD ECIEEEEEEA EGESPKGFVT SSTEEKIPSV SELSVSLKNT MLDGKNQNQQ KYGGKVDNGH FANTSSGHKS ANEQLPPSIS FVDVTEMTED
601: EWSNFLEKFQ ELLYPAFAKR KSITLGQRQR QRLGTSCQF

Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF

Arabidopsis Description

PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.