CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97187	Soybean	cytosol, peroxisome, plastid	92.85	94.9
KRH06459	Soybean	cytosol	74.71	76.1
KRH47902	Soybean	cytosol	74.21	75.08
PGSC0003DMT400000336	Potato	cytosol	62.56	65.85
Solyc01g095990.2.1	Tomato	cytosol	62.4	65.67
PGSC0003DMT400018139	Potato	endoplasmic reticulum	60.23	63.73
VIT_15s0046g00440.t01	Wine grape	plastid	60.9	63.54
Solyc05g050590.2.1	Tomato	endoplasmic reticulum	59.4	62.85
KRH60051	Soybean	cytosol	56.07	59.33
KRH27827	Soybean	extracellular	15.47	59.24
KRH77661	Soybean	nucleus	55.91	59.05
KRH41324	Soybean	cytosol	55.74	58.88
KRH64453	Soybean	cytosol	56.91	58.66
KRG95041	Soybean	cytosol, plastid	21.63	28.08
KRH66669	Soybean	mitochondrion	22.3	27.97
KRH75169	Soybean	cytosol	25.79	24.26
KRH71011	Soybean	cytosol	25.79	24.11
KRH45131	Soybean	cytosol	24.96	23.51
KRH01418	Soybean	cytosol	24.79	23.35

Protein Annotations

EntrezGene:100817301	MapMan:27.5.2.3	Gene3D:3.10.20.90	EMBL:ACUP02002127	EnsemblPlantsGene:GLYMA_03G257600	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1JS00	InterPro:IPR000403	InterPro:IPR000626
EnsemblPlants:KRH68915	ProteinID:KRH68915	ProteinID:KRH68915.1	InterPro:Kinase-like_dom_sf	PFAM:PF00240	PFAM:PF00454
InterPro:PI3/4_kinase_cat_dom	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF180	SMART:SM00213	SUPFAM:SSF54236
SUPFAM:SSF56112	UniParc:UPI00023379B8	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	:	:

Description

hypothetical protein

Coordinates

chr3:+:45208233..45211197

Molecular Weight (calculated)

67161.8 Da

IEP (calculated)

6.566

GRAVY (calculated)

-0.291

Length

601 amino acids

Sequence
(BLAST)

001: MSSAGVSTLT VVPTEPLLSP KAFPFPIPSH LSLEDKSIFI YLSFSGSLTP IRVMEWDTIE SVKFKIQRCE SLPFLTNKQK LVYAGRELAR SDTPLKDYGV
101: TDGNVLHLVI KLSDLQVINV KTSCGKEFTF QVERGRDVGY IKQRIARREK QFDDPEEQEL VCNGERLEDQ RLIDDICCKH NDAAVHLFVR KKHVKVQRRP
201: LELSIVAKDL IDKKKNDVNG NTNRRSYDVG KEDTIRKSDV IQRAVPRKPP GRDFILEPVI INHKIELAPA IRNMVNSTYE GLGSGKCPIR SAEGTGGAYF
301: MLDSAEQKYV SVFKPIDEEP MAVNNPRGLP LSLDGEGLKK GTRVGQGAFR EVAAYVLDHP LSGCQRHSLF GDGKGFAGVP PTLMVKCLHK AFNYPRELTP
401: KIGSLQMFTE NSGSCEDMGP GAFPVKEVHK ITVLDIRLAN ADRHAGNILI SKEEDNNQSV LIPIDHGYCL PTSFEDCTFE WLYWPQARQP YSSETIDYIK
501: SLDAEEDIAL LKFHGWDLPV ECARTLRIST MLLKKGVERG LTPFAIGSLM CRESLNKESV IEEVVQAALD SVLPGTSEAT LLDSVSQILD LHLDEIVRSH
601: L

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.