Factsheet for Solyc04g005270.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g047770.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	Solyc07g047770.2.1	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004869	Potato	cytosol	94.38	96.33
Solyc05g010810.1.1	Tomato	extracellular	82.66	82.66
VIT_01s0010g00600.t01	Wine grape	cytosol	77.19	78.66
KRH75169	Soybean	cytosol	72.5	72.61
KRH71011	Soybean	cytosol	72.34	72.01
CDY16149	Canola	cytosol, mitochondrion, plastid	67.5	71.05
Bra024724.1-P	Field mustard	plastid	67.97	70.16
CDY48067	Canola	cytosol	67.34	69.97
CDX83526	Canola	cytosol	66.88	69.59
CDX85013	Canola	mitochondrion	67.19	69.24
AT1G26270.1	Thale cress	cytosol	68.12	69.21
CDY36079	Canola	cytosol	66.56	68.93
Bra011020.1-P	Field mustard	cytosol	66.56	68.93
AT2G03890.1	Thale cress	cytosol	70.0	68.92
Bra025140.1-P	Field mustard	cytosol	62.5	68.38
CDY34563	Canola	cytosol	65.62	67.96
AT1G13640.1	Thale cress	cytosol	65.31	67.2
CDY56175	Canola	cytosol	62.97	65.96
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	60.47	63.97
Zm00001d026559_P001	Maize	plastid	59.06	60.87
EES13055	Sorghum	plastid	59.38	60.8
TraesCS2B01G570500.1	Wheat	peroxisome	58.12	60.19
TraesCS2D01G541800.1	Wheat	peroxisome	58.28	59.3
TraesCS2A01G540100.1	Wheat	peroxisome	58.44	59.18
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	57.97	57.7
Solyc10g078170.1.1	Tomato	cytosol, plastid	36.09	40.81
Solyc05g050590.2.1	Tomato	endoplasmic reticulum	26.41	29.75
Solyc01g095990.2.1	Tomato	cytosol	25.94	29.07
Solyc03g083350.2.1	Tomato	cytosol	25.94	28.62
Solyc08g082480.2.1	Tomato	cytosol	23.44	25.73

Protein Annotations

EnsemblPlants:Solyc04g005270.1.1	EnsemblPlantsGene:Solyc04g005270.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403	InterPro:PI3/4_kinase_cat_dom
InterPro:Ubiquitin-like_domsf	PANTHER:PTHR15245	PANTHER:PTHR15245:SF37	PFAM:PF00454	SUPFAM:SSF54236	UniParc:UPI00027661C2
UniProt:K4BND3	MapMan:27.5.2.3	:	:	:	:

Description

No Description!

Coordinates

chr4:-:196342..198264

Molecular Weight (calculated)

70992.5 Da

IEP (calculated)

5.914

GRAVY (calculated)

-0.365

Length

640 amino acids

Sequence
(BLAST)

001: MSRNLDNCPV QTQMAVAIFK SPLGGEYHGK ARMEGKSTGR RRVFVQTETG CVLGMELERS DNAHTVKRRL QLALNFPVEE SSLTFGDRVL NNDLSAVRND
101: SPLLLTRNFM HRSSSTPCLL PTGKDHIQPR DQSGPIEILG NVGRFAETKQ LIQEIVKAIK TGVDPIPVHG GLGGGYFFRN SRGESVAIVK PTDEEPFAPN
201: NPKGFVGKAL GQPGLKRSVR VGETGYREVA AYLLDTDHFA NVPATTLVKI THSVFNVNDG VNGDKPLSKK QPVSKIASFQ QFVPHDFDAS DHGTSNFAVA
301: AVHRIGILDI RIFNTDRHAG NLLVRKLDGI GQFGQVELIP IDHGLCLPES LEDPYFEWIH WPQASIPFTD DELEYIKKLD PIRDSDMLRS ELPMIREACL
401: RVLVLSTIFL KEAAAYGLCL AEIGEMMTRE FRSGEEKPSE LEVVCLEARS LIAEREILSP KTEVDNEFQF DIDCEDSGYE ASPKSIPRDF TNRNPFHLPI
501: GGNGCFPLSK LDESIEEVES DGEDEKSFNY VPAPAKNIAV SKLSMSLKNT SLGEKKLKYP NISGTKPENG YLASSSSGHR SANEQLPASV TFVKLSDMND
601: VEWGLFLDKF EELLYPAFAK RKSITLGQRQ MQRLGTSCQF

Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF

Arabidopsis Description

PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.