CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47844	Canola	plastid	93.09	92.91
Bra027730.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	93.86	91.74
CDY46532	Canola	cytosol	79.27	89.39
CDY64881	Canola	cytosol	81.19	85.98
CDY27320	Canola	cytosol	52.59	56.03
CDX83360	Canola	cytosol	32.44	53.82
CDY66313	Canola	cytosol	56.43	53.36
CDX87135	Canola	cytosol	47.22	52.79
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.26	51.72
CDX88085	Canola	cytosol	51.25	46.52
CDX80424	Canola	cytosol	51.25	46.52
CDX95703	Canola	cytosol	43.38	45.56
CDX89977	Canola	cytosol	17.27	28.94
CDY06957	Canola	cytosol, peroxisome, plastid	24.95	26.48
CDY14747	Canola	cytosol, peroxisome, plastid	24.95	26.48
CDY56175	Canola	cytosol	29.75	25.37
CDY16149	Canola	cytosol, mitochondrion, plastid	29.17	25.0
CDX85013	Canola	mitochondrion	29.56	24.8
CDY35435	Canola	cytosol, extracellular, vacuole	24.76	24.39
CDY22484	Canola	cytosol, extracellular, vacuole	24.76	24.39
CDY34563	Canola	cytosol	28.79	24.27
CDY36079	Canola	cytosol	28.79	24.27
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	26.1	24.2
CDX83526	Canola	cytosol	27.83	23.58
CDY48067	Canola	cytosol	27.64	23.38
CDX90007	Canola	cytosol	8.64	20.0
CDY27202	Canola	plasma membrane	26.49	13.13

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	GO:A0A078F1N9	UniProt:A0A078F1N9	EnsemblPlants:CDY08380	ProteinID:CDY08380
ProteinID:CDY08380.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00000110001
InterPro:IPR000403	InterPro:IPR000626	PFAM:PF00240	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PFscan:PS50053
PANTHER:PTHR10666	PANTHER:PTHR10666:SF134	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0004EDC843	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	SEG:seg	:	:	:	:

Description

BnaC09g12160DBnaC09g12160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F1N9]

Coordinates

chrLK031985:-:702489..704592

Molecular Weight (calculated)

57763.7 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.193

Length

521 amino acids

Sequence
(BLAST)

001: MSVADVALTP IQRGLGFSFA HYSVKSILVF LRISDSTTMP MLILDSDSIA DLKLKIQTVC NEFRVTRQRL VFCGRELARN ASRARDYGVT DNSVLHLLLK
101: KLCDPLLVTV VTACGKAFDF HVDRRRDVGY LKKRISKEGN KGFLDVDDQE IFFRGERLDD NRVLGGICGD GNSVIHLLLK KTVKDFLLEP LLLNPAVKLP
201: QAIDDMIGRT VDGLNKGNPP VRSAEGTGGT YLMQDSTGLS YVSVFKPMDE EPMAVNNPQQ LPLSSDGQGL KRGTRVGEGA IREVAAYLLD HPKSGPRSQV
301: KGFAGVPPTA MVRSFHKVCC TKDAKVGSLQ MFMKNDGSCE DIGPGSFPVE QVHKISVFDI RMANADRHAG NILTGKGEDS RTVLIPIDHG YCLPENFEDC
401: TFEWLYWPQA KVPFSEDTLD YIDSLDTEQD ITLLQLNGWD VPEAVARTLR ISTMLLKKGV ERNLTPYQIG SMMCRETVNK DSAIEEIVRE AHNSVLPASS
501: EATFLEAVSM AMERRLDELI K

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.