CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83360	Canola	cytosol	61.49	97.13
Bra000427.1-P	Field mustard	cytosol	87.7	88.41
CDY27320	Canola	cytosol	67.54	68.51
CDY66313	Canola	cytosol	70.77	63.7
AT2G46500.1	Thale cress	cytosol	68.55	60.07
CDX87135	Canola	cytosol	46.37	49.36
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.77	48.71
CDY46532	Canola	cytosol	41.33	44.37
CDY64881	Canola	cytosol	43.95	44.31
CDY47844	Canola	plastid	45.77	43.49
CDY08380	Canola	cytosol	45.56	43.38
CDX88085	Canola	cytosol	48.19	41.64
CDX80424	Canola	cytosol	47.58	41.12
CDX89977	Canola	cytosol	16.73	26.69
CDY06957	Canola	cytosol, peroxisome, plastid	23.59	23.83
CDY14747	Canola	cytosol, peroxisome, plastid	23.39	23.63
CDY16149	Canola	cytosol, mitochondrion, plastid	26.81	21.88
CDY22484	Canola	cytosol, extracellular, vacuole	22.98	21.55
CDY35435	Canola	cytosol, extracellular, vacuole	22.98	21.55
CDY34563	Canola	cytosol	26.81	21.52
CDY36079	Canola	cytosol	26.81	21.52
CDY56175	Canola	cytosol	26.41	21.44
CDX85013	Canola	mitochondrion	26.81	21.42
CDX83526	Canola	cytosol	26.41	21.3
CDY48067	Canola	cytosol	26.21	21.1
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	23.39	20.64
CDX90007	Canola	cytosol	8.67	19.11
CDY27202	Canola	plasma membrane	24.19	11.42

Protein Annotations

EnsemblPlants:CDX95703	EnsemblPlantsGene:GSBRNA2T00101597001	GO:A0A078E8J4	InterPro:IPR000403	InterPro:Kinase-like_dom_sf	InterPro:PI3/4_kinase_cat_dom
ncoils:Coil	PANTHER:PTHR10666	PANTHER:PTHR10666:SF180	PFAM:PF00454	ProteinID:CDX95703	ProteinID:CDX95703.1
SEG:seg	SUPFAM:SSF56112	UniParc:UPI0004EE5234	MapMan:27.5.2.3	:	:

Description

BnaC03g25840D

Coordinates

chrLK031890:-:730214..733528

Molecular Weight (calculated)

55308.7 Da

IEP (calculated)

5.193

GRAVY (calculated)

-0.601

Length

496 amino acids

Sequence
(BLAST)

001: MSSADVTLSP VRNEPSMMPL VHANSFRAKP VEKNFELSIV APPQVDVKRA IEAADGIVQP RKQLLNDFSL EPVIVNPKAK LPEVVKDMIS SASDGLRSGN
101: PPVRSREGTG GAYFMQGSSG NKYVGVFKPI DEEPTAENNP HGLPLSPNGE GLKKGTKVGE GALREVAAYI LDHPKSGRRS MCGEERGFAG VPPTTMIECL
201: HPGFNHPNGI KTKIGSLQMF TENDGSCEDM GPASFPVEEV HKISVLDIRL ANADRHGGNI LMRKDENGKI VLIPIDHGYS LPESFEDCTF EWLYWSQARK
301: PYSSETLDYI RSLDAEEDIS LLKFHGWKMP SETARTLRIS TMLLKKGAER GLTAFEIGNM MCRDTLTKKS LVEEMVEEAQ EAVLPETSEA TFMEALSDVM
401: DYHLDEVVHV KRRYEAFGEV VRTMEKKSKE KEGEAEKTRQ EEEEERKENR EKEDGERATV KGLPHEQVRQ PGKDFSSEAL ENIPKSQVKS IFLFKD

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.