Factsheet for Solyc08g075650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g047770.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31810.1	Solyc07g047770.2.1	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079306	Potato	cytosol	99.01	99.75
GSMUA_Achr5P13600_001	Banana	extracellular	52.96	72.39
Os10t0119300-01	Rice	mitochondrion	73.89	71.94
Bra038438.1-P	Field mustard	extracellular	51.97	69.64
CDY27130	Canola	cytosol, mitochondrion	58.62	60.56
Solyc03g115680.2.1	Tomato	plastid	58.62	45.77
TraesCS2B01G406800.1	Wheat	cytosol	72.41	31.55
HORVU2Hr1G092520.9	Barley	cytosol	63.79	30.61
CDY49153	Canola	cytosol	72.66	28.15
Solyc07g005480.2.1	Tomato	vacuole	60.84	27.94
KRH62678	Soybean	cytosol	79.31	26.7
CDY12361	Canola	cytosol	73.65	26.65
KRH39699	Soybean	cytosol	78.82	26.1
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	83.25	25.86
Solyc06g069670.2.1	Tomato	nucleus	58.62	25.76
Bra023204.1-P	Field mustard	cytosol	72.41	25.28
AT1G31810.1	Thale cress	cytosol	76.35	25.2
KXG25260	Sorghum	cytosol	73.89	24.79
CDY12294	Canola	cytosol	72.66	24.2
Solyc12g010110.1.1	Tomato	cytosol	56.16	17.55
Solyc08g014430.2.1	Tomato	nucleus	21.67	11.62
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	21.18	10.96
Solyc03g113710.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	20.2	10.95
Solyc07g064010.2.1	Tomato	golgi	23.4	10.69
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	21.92	10.27
Solyc02g092470.2.1	Tomato	nucleus	21.18	9.67
Solyc10g006540.2.1	Tomato	extracellular	22.17	9.65
Solyc01g099650.2.1	Tomato	nucleus	21.18	9.52
Solyc12g019480.1.1	Tomato	nucleus	20.69	9.46
Solyc06g082910.2.1	Tomato	extracellular	21.67	9.4
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	20.69	9.24
GSMUA_Achr5P13590_001	Banana	cytosol	20.69	9.13
Solyc07g052730.2.1	Tomato	golgi	20.94	8.9
Solyc05g046120.2.1	Tomato	plasma membrane	19.95	8.82
KRH15653	Soybean	cytosol	31.77	8.15
Solyc07g005500.2.1	Tomato	cytosol	7.14	5.24
Solyc08g075670.1.1	Tomato	cytosol	3.2	2.6
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	2.46	2.16
Solyc06g069660.1.1	Tomato	mitochondrion	0.49	0.59

Protein Annotations

EnsemblPlants:Solyc08g075650.2.1	EnsemblPlantsGene:Solyc08g075650.2	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF334	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	UniParc:UPI000276B8B6	UniProt:K4CMT2	MapMan:20.2.2.6.2	:	:

Description

Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4CMT2]

Coordinates

chr8:-:59791262..59800608

Molecular Weight (calculated)

45308.6 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.386

Length

406 amino acids

Sequence
(BLAST)

001: MQGSLWADTQ NKENTSRAPE IDITELENLF SVASATDGTS KGGGRRGSKI NKPEKVQLID LRRAYNCEIM LTKIKIPLPD MLNAILALDS SALDIDQVEN
101: LIKFCPTKEE METLRNYNGD KGMLGKCEQF FLELMKVPRV ESKLRVFSFT ITFSNQVKDL RSNLSTINDA TREVKESAKL RQIMQTILTL GNALNQGTAR
201: GSAVGFKLDS LLKLSDTRAR NNKMTLMHYL CKLLAEKMPE LLDFDKDLLH LEAASKIQLK SLAEEMQAVS KGLEKVEQEL TASDNDGTIS SGFQKVLKNF
301: LDTAEAEVKS LTTLYIEVGR SADSLSLYFG EDPARCPFEQ VTQILVVFMK MFKKSRDENE QAADAEKKKL EKEALKEQVA ASSSGKKGVG DSDRVKLNFL
401: NQLHAV

Best Arabidopsis Sequence Match ( AT1G31810.2 )
(BLAST)

0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT

Arabidopsis Description

FH14Formin-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.