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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400058304 Potato plasma membrane 93.63 91.88
GSMUA_Achr6P04430_001 Banana cytosol 31.72 58.59
CDY70125 Canola cytosol 32.61 53.33
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 32.61 52.24
VIT_01s0026g00950.t01 Wine grape endoplasmic reticulum 53.12 51.1
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 48.92 49.48
AT1G70140.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 47.77 49.34
Bra024640.1-P Field mustard vacuole 46.5 49.06
VIT_14s0108g00290.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 50.45 48.35
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 49.04 48.01
CDY16239 Canola vacuole 42.29 47.29
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 37.2 46.5
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 46.11 45.71
Solyc03g113710.2.1 Tomato endoplasmic reticulum, nucleus, plastid 42.8 44.86
KRG99223 Soybean golgi, vacuole 44.2 44.83
CDY31597 Canola mitochondrion 36.31 44.81
KRH45763 Soybean endoplasmic reticulum, vacuole 44.46 44.18
AT1G24150.2 Thale cress endoplasmic reticulum 29.55 43.77
KRH69441 Soybean golgi, plasma membrane 44.59 43.53
GSMUA_Achr8P22610_001 Banana plasma membrane 41.91 43.4
KRH74702 Soybean endoplasmic reticulum 44.2 42.73
CDY55061 Canola mitochondrion, nucleus 39.87 42.07
CDY24501 Canola mitochondrion, nucleus 39.62 38.44
Bra017889.1-P Field mustard nucleus 38.6 38.35
CDY33614 Canola mitochondrion, nucleus 37.32 38.05
EES05554 Sorghum plasma membrane 42.8 36.52
Zm00001d017983_P001 Maize plasma membrane 42.55 36.26
TraesCS6D01G291400.1 Wheat endoplasmic reticulum, plasma membrane 41.53 36.18
TraesCS6B01G342200.1 Wheat endoplasmic reticulum, plasma membrane 41.53 36.18
TraesCS6A01G312000.2 Wheat plastid 41.53 35.94
KXG39193 Sorghum plastid 38.6 35.56
HORVU6Hr1G076870.4 Barley plastid 41.4 34.69
AT1G59910.1 Thale cress nucleus 40.51 34.23
Solyc03g044060.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 29.17 26.41
Solyc02g092470.2.1 Tomato nucleus 29.68 26.21
Solyc08g014430.2.1 Tomato nucleus 24.46 25.36
Solyc05g046120.2.1 Tomato plasma membrane 29.04 24.84
Solyc09g042740.2.1 Tomato endoplasmic reticulum, vacuole 28.66 24.75
Solyc01g099650.2.1 Tomato nucleus 28.28 24.58
Solyc10g006540.2.1 Tomato extracellular 28.92 24.33
Solyc12g019480.1.1 Tomato nucleus 27.52 24.32
Solyc07g064010.2.1 Tomato golgi 27.26 24.07
Solyc06g082910.2.1 Tomato extracellular 28.66 24.04
Solyc07g052730.2.1 Tomato golgi 27.77 22.83
Solyc08g075650.2.1 Tomato cytosol 10.96 21.18
Solyc03g115680.2.1 Tomato plastid 12.36 18.65
Solyc07g005480.2.1 Tomato vacuole 13.89 12.33
Solyc06g069670.2.1 Tomato nucleus 13.63 11.58
Solyc12g010110.1.1 Tomato cytosol 16.43 9.93
Solyc07g005500.2.1 Tomato cytosol 6.37 9.04
Solyc03g115670.1.1 Tomato cytosol, mitochondrion 4.2 7.14
Solyc06g069660.1.1 Tomato mitochondrion 2.55 5.88
Solyc08g075670.1.1 Tomato cytosol 3.44 5.4
Protein Annotations
EnsemblPlants:Solyc05g006430.1.1EnsemblPlantsGene:Solyc05g006430.1Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:FH2_ForminInterPro:IPR015425ncoils:CoilPANTHER:PTHR23213PANTHER:PTHR23213:SF239PFAM:PF02181
PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI00027673CFUniProt:K4BWH0MapMan:20.2.2.6.1:::
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4BWH0]
Coordinates
chr5:+:1066262..1068706
Molecular Weight (calculated)
86197.5 Da
IEP (calculated)
9.750
GRAVY (calculated)
-0.447
Length
785 amino acids
Sequence
(BLAST)
001: MSINMILYLF IFYILSMIPS VTSQSQNVET FFPFPLPNLL PPPIPPVQRS PPPPPSSPPV LPPDPTDKPA LPPSVSTPDT SSNKAVGTAI GVTAASTVVL
101: SALLFFFLVR YSRRRRKQQE GTAVGDPRGG GGAIHQDQFL KFEGNLKGVI VDENGLDVLY WRKMESDEQR KESFKKKKVF VNALRDEEEK RMISRGVGGR
201: KKPDHPIQEL PLLRGKSSTS QSPSWLDLEN KQPNPDDGIV FHPMERQASS SQLETRAPPP PPAPPLSVSA IPKAPGPPPP PPPGLKKGPP LPPPPTHSSA
301: SSSGEGGSGS GNDKVKLKPL HWDKLNANVE HSMVWDKLDR GSFKFDGDLM EALFGCVATN KKPSGTESRA LSPRADISGP PSQIFILETR KSQNIAIVLR
401: SLGVTRKEII DALIDGQGLS VDTLEKLCRI APTKEEETEV VTFEGDPTRL ADAESFLFHI LKAVPSAFTR FNAMLFRSNY GTEIQHHKEY LQTLELSCKE
501: LKAQRLFLKL LEAILKAGNR MNAGTSRGNA QAFKLTALRK LSDVKSMDGK TTLLHFVVQE VVRAEGKRCV LNRNQSLRRS NSQTTASSAI PTSKNTTEND
601: ETEKEYMMLG LPIVGGLSSA FSNVKKAAAI DYDLLSKTCS MLTAQISEIK THLAQRDNVK GLFGKEMKKF LDAAEKEMKT VRDEQDRVME LVKKTTDYYQ
701: AGASDDKGWQ PLQLFAIVKD FLEMVDKVCV EITRNMQKKK PLVAVGGSSS PGMENSRAVR FPKLPANFLS DISKSSSSSD TSDDS
Best Arabidopsis Sequence Match ( AT1G70140.1 )
(BLAST)
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.