Factsheet for Bra024640.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16239	Canola	vacuole	93.28	98.86
AT1G24150.2	Thale cress	endoplasmic reticulum	56.32	79.06
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	73.66	68.33
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	38.71	58.78
GSMUA_Achr6P04430_001	Banana	cytosol	30.24	52.94
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	54.03	49.26
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	49.06	46.5
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	50.94	46.28
PGSC0003DMT400058304	Potato	plasma membrane	49.46	46.0
Bra017889.1-P	Field mustard	nucleus	46.37	43.67
KRG99223	Soybean	golgi, vacuole	45.43	43.67
KRH45763	Soybean	endoplasmic reticulum, vacuole	46.24	43.54
KRH74702	Soybean	endoplasmic reticulum	46.51	42.61
KRH69441	Soybean	golgi, plasma membrane	45.83	42.41
GSMUA_Achr8P22610_001	Banana	plasma membrane	41.8	41.03
Bra012246.1-P	Field mustard	cytosol	9.95	37.76
Bra029655.1-P	Field mustard	cytosol	15.32	37.62
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	42.2	34.85
EES05554	Sorghum	plasma membrane	42.88	34.67
TraesCS6A01G312000.2	Wheat	plastid	42.07	34.51
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	41.67	34.41
Bra001256.1-P	Field mustard	plastid	17.47	34.12
Zm00001d017983_P001	Maize	plasma membrane	41.94	33.88
HORVU6Hr1G076870.4	Barley	plastid	42.61	33.83
KXG39193	Sorghum	plastid	38.31	33.45
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	29.84	27.21
Bra039561.1-P	Field mustard	golgi	30.38	27.0
Bra029012.1-P	Field mustard	plasma membrane	30.91	26.78
Bra002969.1-P	Field mustard	plasma membrane	31.18	26.45
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	27.28	24.79
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	28.09	24.39
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	29.03	24.08
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	28.63	23.8
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	26.08	23.57
Bra031838.1-P	Field mustard	cytosol	12.9	21.82
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	29.3	19.98
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	21.64	19.95
Bra038438.1-P	Field mustard	extracellular	7.66	18.81
Bra023204.1-P	Field mustard	cytosol	19.09	12.21
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	18.95	11.4
Bra007822.1-P	Field mustard	cytosol	17.07	11.36
Bra002668.1-P	Field mustard	cytosol	18.01	10.37
Bra020385.1-P	Field mustard	cytosol	18.01	9.6
Bra005952.1-P	Field mustard	nucleus	18.82	9.46
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.35	8.85
Bra009307.1-P	Field mustard	cytosol	8.6	7.93
Bra020386.1-P	Field mustard	cytosol	4.17	6.8

Protein Annotations

MapMan:20.2.2.6.1	EnsemblPlantsGene:Bra024640	EnsemblPlants:Bra024640.1	EnsemblPlants:Bra024640.1-P	ncoils:Coil	InterPro:FH2_Formin
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015425	UniProt:M4E785	PFAM:PF02181
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF239	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002542197	SEG:seg	:	:	:

Description

AT1G70140 (E=4e-206) ATFH8 | ATFH8 (formin 8); actin binding / actin filament binding / profilin binding

Coordinates

chrA09:-:23866999..23869323

Molecular Weight (calculated)

81948.6 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.471

Length

744 amino acids

Sequence
(BLAST)

001: MLKQPWSPLR LLPHLTLTFL SSILLLLPHH SFSQSDSPQN IETFFPNETL TAPPPSPVPL PQQNPQSPSS SSSSDREKIT RAILITAAST LLVAAVFFLF
101: VHIYTVRRRR RRDRVINVAN TLPPAPPLAE AALAREGFTR FGGNVKGLIL DENGLDVLYW RKSQSQRGNK SGSFRKEIVH GDDDDQEKNV IYSKNKKKSE
201: MPLLRGRSST SHSVVHNHPP PPVKSESFEF AKPDPPPPPP PPVNQTAPAP PPPPPPSRSN GPSPAPPPPP PLKKTAALSK PPPAPRGSSS GEGSSSENGQ
301: VKLKPLHWDK VNPDSDHSMV WDKIDRGSFS FDADLMEALF GYVAVGKKSP DHEKPSSTTP SQIFILDPRK SQNTAIVLKS LGMTRDELVE SLMEGNDFHP
401: DTLERLARIA PTQEEQSAIL QFDGDTTKLA DAESFLFHLL KAVPSAFTRL NALLFRANYY PEIANHSNSL KTLDAACTEL RSRGLFVKLL EAILKSGNRM
501: NAGTARGDAQ AFNLTALLKL SDVKSVDGRT TLLNFVVEEV VRSEGKRCLI NRRSLSRTSS SSISEVISKE EQEKEYLRLG LPVVGGLSSE FSNVKKAASI
601: DYDTVSATCL ALTSRAKEAR RVLSQCGGDN RFVEKMVEFL DAAEEEVKVA REEEKKVMEL VKRTTEYYQA GGPAKGKNLL HLFVIVRDFL AMVDKVCVEI
701: ARNLQRRTTG SPQQQRNAVK FPVLPPNFMS DRSRSDSGGS DSDM

Best Arabidopsis Sequence Match ( AT1G70140.1 )
(BLAST)

001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM

Arabidopsis Description

FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.