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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86310 Canola endoplasmic reticulum, plasma membrane 99.5 99.5
AT5G48360.1 Thale cress extracellular, vacuole 65.68 67.77
Bra029655.1-P Field mustard cytosol 19.08 50.83
Bra001256.1-P Field mustard plastid 22.43 47.51
Bra012246.1-P Field mustard cytosol 11.03 45.41
GSMUA_Achr11P... Banana mitochondrion, plastid 21.69 40.7
PGSC0003DMT400056393 Potato cytosol 22.68 38.12
GSMUA_Achr6P18370_001 Banana nucleus 26.27 37.66
GSMUA_Achr5P25760_001 Banana mitochondrion 18.59 34.17
Os01t0897700-01 Rice cytosol 10.29 34.02
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 29.62 33.06
VIT_00s0227g00200.t01 Wine grape cytosol 6.2 32.68
GSMUA_Achr10P... Banana plastid 30.86 31.01
Solyc09g042740.2.1 Tomato endoplasmic reticulum, vacuole 34.82 30.91
KRH47952 Soybean cytosol 29.49 30.67
TraesCS1D01G010200.1 Wheat plastid 21.31 30.28
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 25.03 30.1
Solyc06g082910.2.1 Tomato extracellular 34.82 30.02
Zm00001d021173_P001 Maize plasma membrane 28.13 29.79
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 34.82 29.77
TraesCS1B01G059400.1 Wheat plastid 20.69 29.66
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 28.75 29.44
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 28.5 29.26
TraesCS3A01G397900.1 Wheat plasma membrane 34.2 29.08
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 30.24 29.08
TraesCS3B01G429900.1 Wheat plasma membrane 34.2 28.93
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 28.13 28.84
HORVU3Hr1G089510.1 Barley plasma membrane 33.95 28.81
OQU88036 Sorghum extracellular, plasma membrane 33.46 28.72
TraesCS5A01G304700.1 Wheat golgi 28.0 28.72
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 30.48 28.7
KRH00989 Soybean extracellular, golgi, vacuole 36.8 28.59
KRH06515 Soybean endoplasmic reticulum, plastid, vacuole 38.04 28.45
Zm00001d012158_P001 Maize extracellular, plasma membrane 33.46 28.39
Zm00001d042506_P002 Maize extracellular, plasma membrane 33.46 28.24
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 31.23 28.09
KRH40232 Soybean endoplasmic reticulum, extracellular 35.94 27.97
TraesCS1A01G011800.1 Wheat extracellular 18.46 27.95
TraesCS3D01G391800.1 Wheat mitochondrion 32.84 27.84
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 28.5 27.32
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 28.62 27.18
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 36.18 26.76
HORVU1Hr1G002300.8 Barley plastid 23.79 26.52
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 29.24 26.37
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 25.15 24.46
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 24.66 23.72
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 14.0 23.06
EES17525 Sorghum endoplasmic reticulum, plasma membrane 22.43 22.1
Bra031838.1-P Field mustard cytosol 11.9 21.82
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 22.06 21.81
Bra024640.1-P Field mustard vacuole 19.95 21.64
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 22.06 21.63
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 21.56 21.25
GSMUA_Achr7P23740_001 Banana plastid 30.98 20.85
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 20.45 20.57
Bra029012.1-P Field mustard plasma membrane 21.69 20.37
Bra039561.1-P Field mustard golgi 21.07 20.31
Bra002969.1-P Field mustard plasma membrane 21.93 20.18
Bra038438.1-P Field mustard extracellular 6.44 17.16
Bra017889.1-P Field mustard nucleus 16.11 16.46
Zm00001d035757_P003 Maize plasma membrane 22.55 10.81
Bra007822.1-P Field mustard cytosol 12.89 9.3
Bra002668.1-P Field mustard cytosol 14.25 8.9
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 13.63 8.89
Bra023204.1-P Field mustard cytosol 12.76 8.86
Bra020385.1-P Field mustard cytosol 14.25 8.24
Bra005952.1-P Field mustard nucleus 13.01 7.09
Bra020386.1-P Field mustard cytosol 3.84 6.8
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 12.76 6.33
Bra009307.1-P Field mustard cytosol 6.07 6.07
Protein Annotations
EnsemblPlants:Bra037491.1EnsemblPlants:Bra037491.1-PEnsemblPlantsGene:Bra037491Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213PANTHER:PTHR23213:SF261PFAM:PF02181
PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI000253F91EUniProt:M4F8S9MapMan:20.2.2.6.1:::
Description
AT5G48360 (E=8e-162) | formin homology 2 domain-containing protein / FH2 domain-containing protein
Coordinates
chrA06:+:21200697..21203353
Molecular Weight (calculated)
88312.1 Da
IEP (calculated)
5.902
GRAVY (calculated)
-0.276
Length
807 amino acids
Sequence
(BLAST)
001: MQTFCFSFLL LLSCAPSPLS YASSALNLGR RHLSDDAGSA LLTPASPTSP PFFPLESSAP PLPPPPSPPT FAAFPTTFPA NISALVLPRS PKPHSTSPAI
101: LVPAISAVLV VAAVLGVALF LYGRWKGQNR HFKDTNTTLG GGSSSSSHTS EERHVITNNF SVSASSPTSE VLYLGGEEEP DRVVTSFVKP PESPEIRPLP
201: PLPRSFQPSY EAEIHSERNE EEEDEEEEEE FFSPLASLAS SANSSPSRSG FEQSSCSSSS SGWVSPARSF SMTLSPVQQQ RSFSRLSDVS LEQSLQSLSP
301: ERLRVRNNNG HVSSSLRMFS FFNQNLSFPR ISSASTSPDR GGFVRTPLSS LYSSVSNSPD GLFRKFINSS PPIWNDFSRN VKSVLLSSES VSSRRDFVIN
401: IGGQAGAVAA PPPTRPPPLV PPSQSFVVQN DVKKPSFSDK VNQGSCQNTA WDCLKANSFK LNKEIVETLF ISNSSSPNLN QRGLTYDLPT QNEVSYQNIA
501: TRLQLLNLTT KDVSNALLEG DSGALGAELL DCLSRLAPSK EEERKLRNAS DDSVIIKLTP AERFLKELLQ VPFVFKRVDA LLSVANFYPE VEYLRRSFGV
601: VQAACEELRN NKTFSRLLEA ILKTGNKMSV GTNSHAFKFD TLLKLAEVKG LDGRSSVLHF AVQEMIKSEG SVKALDRIRN LSSEMETVKK SADIEYGVLT
701: NGVLKLYQGI RSIKELLILS EESGCSGDQW MKFETKMGRF LETAGEEIVR IKAQESSTLS ALEEVTELFH GGSFKEEGHT LRVFMAVRDF LSTLDEVCND
801: MGERFSA
Best Arabidopsis Sequence Match ( AT5G48360.1 )
(BLAST)
001: MQNFWFAIFF FLLTCAPPSP LSYASTVTLS RRLLYDYESP LPLPLSPISP PFFPLESSPP SPPPPLPPTP PTTFAVFPTF PANISALVLP RSSKPHHTSP
101: TLLLPALSAV LVIATVIGLA LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI RTGGTFFLKQ DSPEIRPLPP
201: LPPRSFHHNN YETEVNEEDE EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP SPERLRVRKN YNGNGSSSLR
301: MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP
401: TRPPPLVPPS QPFVVQNDVK KQSFSDQPPK QLHWERLRSS SSKLSKEMVE TMFIANSSNP RDLPIQNQVL DPRKAQNIAT LLQLLNLSTK DVCQALLDGD
501: CDVLGAELLE CLSRLAPSKE EERKLKSFSD GSEIGPAERF LKELLHVPFV FKRVDALLFV ANFHSEIKRL RKSFSVVQVA CEELRNSRMF SILLEAILKT
601: GNMMSVRTNR CGDADAFKLD TLLKLVDVKG LDGRSSLLHF VVQEMMKSEG SVRALEGIRN LNTELSNVKK SADIEYGVLR SNVSRICQGL KNIEALLLLS
701: EESGSYGDQW LKFKERMTRF LKTAAEEIVK IKIRESSTLS ALEEVTEQFH GDASKEGHTM RIFMIVRDFL SVLDQVCKEM GD
Arabidopsis Description
FH9Formin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX37]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.