Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 67.77 | 65.68 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 67.77 | 65.68 |
| CDX85333 | Canola | plasma membrane | 68.54 | 65.13 |
| AT3G07540.1 | Thale cress | plasma membrane | 54.22 | 50.42 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 23.91 | 43.49 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 28.52 | 39.61 |
| PGSC0003DMT400056393 | Potato | cytosol | 24.04 | 39.17 |
| Os01t0897700-01 | Rice | cytosol | 11.89 | 38.11 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 20.72 | 36.9 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 31.07 | 33.61 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 6.27 | 32.03 |
| GSMUA_Achr10P... | Banana | plastid | 32.74 | 31.88 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 34.02 | 31.7 |
| KRH47952 | Soybean | cytosol | 31.2 | 31.44 |
| TraesCS1D01G010200.1 | Wheat | plastid | 22.38 | 30.81 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 35.55 | 30.58 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 25.83 | 30.1 |
| TraesCS1B01G059400.1 | Wheat | plastid | 21.61 | 30.02 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 30.18 | 29.95 |
| Solyc06g082910.2.1 | Tomato | extracellular | 35.29 | 29.49 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 29.41 | 29.26 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 35.04 | 29.15 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 35.17 | 29.13 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 29.16 | 28.97 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 19.69 | 28.89 |
| Zm00001d021173_P001 | Maize | plasma membrane | 28.13 | 28.87 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 39.64 | 28.73 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 34.78 | 28.6 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 34.65 | 28.56 |
| TraesCS5A01G304700.1 | Wheat | golgi | 28.64 | 28.46 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 32.48 | 28.41 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 34.65 | 28.41 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 37.72 | 28.39 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 37.98 | 28.26 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 37.47 | 28.25 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 32.35 | 28.14 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 34.14 | 28.08 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 34.27 | 28.03 |
| HORVU1Hr1G002300.8 | Barley | plastid | 25.45 | 27.49 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 33.38 | 27.42 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 29.28 | 27.2 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 29.03 | 26.71 |
| AT3G25493.1 | Thale cress | vacuole | 5.37 | 26.25 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 27.24 | 25.66 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 25.96 | 24.2 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 25.19 | 24.05 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 33.63 | 21.93 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 24.3 | 21.49 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 20.72 | 21.32 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 23.91 | 20.78 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 12.92 | 19.06 |
| AT5G07780.1 | Thale cress | plastid | 10.74 | 18.1 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 10.36 | 17.38 |
| AT3G32400.2 | Thale cress | cytosol | 10.87 | 17.17 |
| AT1G42980.1 | Thale cress | cytosol | 5.75 | 15.05 |
| AT1G59910.1 | Thale cress | nucleus | 17.65 | 14.85 |
| AT5G07770.3 | Thale cress | plastid | 11.25 | 12.07 |
| Zm00001d035757_P003 | Maize | plasma membrane | 25.45 | 11.82 |
| AT2G25050.1 | Thale cress | cytosol | 16.62 | 11.13 |
| AT5G58160.1 | Thale cress | cytosol | 17.26 | 10.66 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 11.76 | 10.61 |
| AT1G31810.1 | Thale cress | cytosol | 15.47 | 9.84 |
| AT5G07650.1 | Thale cress | cytosol | 10.1 | 9.69 |
| AT5G07740.2 | Thale cress | nucleus | 16.5 | 7.66 |
| AT3G32420.1 | Thale cress | cytosol | 0.9 | 6.54 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | EntrezGene:834889 | ProteinID:AED95658.1 | EMBL:AK118458 | ArrayExpress:AT5G48360 |
| EnsemblPlantsGene:AT5G48360 | RefSeq:AT5G48360 | TAIR:AT5G48360 | RefSeq:AT5G48360-TAIR-G | EnsemblPlants:AT5G48360.1 | TAIR:AT5G48360.1 |
| Unigene:At.29853 | ProteinID:BAA98193.1 | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR015425 | RefSeq:NP_199647.2 |
| PFAM:PF02181 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51444 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | UniProt:Q8GX37 | SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000019708B | SEG:seg | : | : | : |
Description
FH9Formin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX37]
Coordinates
chr5:+:19595536..19598492
Molecular Weight (calculated)
87124.8 Da
IEP (calculated)
7.581
GRAVY (calculated)
-0.310
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNFWFAIFF FLLTCAPPSP LSYASTVTLS RRLLYDYESP LPLPLSPISP PFFPLESSPP SPPPPLPPTP PTTFAVFPTF PANISALVLP RSSKPHHTSP
101: TLLLPALSAV LVIATVIGLA LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI RTGGTFFLKQ DSPEIRPLPP
201: LPPRSFHHNN YETEVNEEDE EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP SPERLRVRKN YNGNGSSSLR
301: MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP
401: TRPPPLVPPS QPFVVQNDVK KQSFSDQPPK QLHWERLRSS SSKLSKEMVE TMFIANSSNP RDLPIQNQVL DPRKAQNIAT LLQLLNLSTK DVCQALLDGD
501: CDVLGAELLE CLSRLAPSKE EERKLKSFSD GSEIGPAERF LKELLHVPFV FKRVDALLFV ANFHSEIKRL RKSFSVVQVA CEELRNSRMF SILLEAILKT
601: GNMMSVRTNR CGDADAFKLD TLLKLVDVKG LDGRSSLLHF VVQEMMKSEG SVRALEGIRN LNTELSNVKK SADIEYGVLR SNVSRICQGL KNIEALLLLS
701: EESGSYGDQW LKFKERMTRF LKTAAEEIVK IKIRESSTLS ALEEVTEQFH GDASKEGHTM RIFMIVRDFL SVLDQVCKEM GD
101: TLLLPALSAV LVIATVIGLA LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI RTGGTFFLKQ DSPEIRPLPP
201: LPPRSFHHNN YETEVNEEDE EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP SPERLRVRKN YNGNGSSSLR
301: MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP
401: TRPPPLVPPS QPFVVQNDVK KQSFSDQPPK QLHWERLRSS SSKLSKEMVE TMFIANSSNP RDLPIQNQVL DPRKAQNIAT LLQLLNLSTK DVCQALLDGD
501: CDVLGAELLE CLSRLAPSKE EERKLKSFSD GSEIGPAERF LKELLHVPFV FKRVDALLFV ANFHSEIKRL RKSFSVVQVA CEELRNSRMF SILLEAILKT
601: GNMMSVRTNR CGDADAFKLD TLLKLVDVKG LDGRSSLLHF VVQEMMKSEG SVRALEGIRN LNTELSNVKK SADIEYGVLR SNVSRICQGL KNIEALLLLS
701: EESGSYGDQW LKFKERMTRF LKTAAEEIVK IKIRESSTLS ALEEVTEQFH GDASKEGHTM RIFMIVRDFL SVLDQVCKEM GD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.