Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02799 | Canola | cytosol | 79.86 | 80.82 |
| CDY32721 | Canola | cytosol | 79.38 | 80.79 |
| Bra002668.1-P | Field mustard | cytosol | 82.07 | 80.42 |
| CDY62689 | Canola | cytosol | 82.07 | 80.42 |
| CDY43877 | Canola | cytosol | 79.15 | 76.02 |
| PGSC0003DMT400029052 | Potato | cytosol | 16.19 | 74.28 |
| Bra020385.1-P | Field mustard | cytosol | 79.54 | 72.13 |
| PGSC0003DMT400020452 | Potato | cytosol | 8.93 | 68.48 |
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 13.51 | 60.42 |
| AT3G32400.2 | Thale cress | cytosol | 23.3 | 59.6 |
| AT3G32420.1 | Thale cress | cytosol | 4.74 | 56.07 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 50.24 | 55.11 |
| KRH72294 | Soybean | cytosol | 50.63 | 53.02 |
| KRH03063 | Soybean | cytosol | 49.45 | 51.82 |
| AT2G25050.1 | Thale cress | cytosol | 46.84 | 50.77 |
| AT5G07780.1 | Thale cress | plastid | 18.56 | 50.65 |
| Solyc12g010110.1.1 | Tomato | cytosol | 46.29 | 45.11 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 47.63 | 43.44 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 47.87 | 43.25 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 47.39 | 42.77 |
| AT1G31810.1 | Thale cress | cytosol | 41.55 | 42.76 |
| Solyc07g005480.2.1 | Tomato | vacuole | 29.3 | 41.97 |
| AT1G42980.1 | Thale cress | cytosol | 9.72 | 41.14 |
| OQU80260 | Sorghum | cytosol | 36.65 | 40.92 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 42.34 | 40.12 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 42.02 | 39.85 |
| Os08t0280200-02 | Rice | nucleus | 27.8 | 39.42 |
| Os02t0794900-00 | Rice | cytosol | 42.81 | 39.3 |
| Zm00001d032101_P001 | Maize | cytosol | 20.7 | 38.47 |
| KXG31267 | Sorghum | cytosol | 45.1 | 38.3 |
| AT5G07770.3 | Thale cress | plastid | 20.3 | 35.25 |
| AT5G07740.2 | Thale cress | nucleus | 44.47 | 33.45 |
| AT5G07650.1 | Thale cress | cytosol | 18.25 | 28.34 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 19.27 | 28.14 |
| HORVU5Hr1G123610.1 | Barley | cytosol, plastid | 0.87 | 27.5 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 6.95 | 18.88 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 13.27 | 18.67 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 13.19 | 18.58 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 7.58 | 18.11 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 10.66 | 17.26 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 14.14 | 17.03 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 10.19 | 16.97 |
| AT3G25493.1 | Thale cress | vacuole | 2.13 | 16.88 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 11.77 | 16.67 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 11.3 | 16.18 |
| AT3G07540.1 | Thale cress | plasma membrane | 10.35 | 15.58 |
| AT1G59910.1 | Thale cress | nucleus | 9.95 | 13.56 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | EntrezGene:835928 | ProteinID:AED97006.2 |
| ArrayExpress:AT5G58160 | EnsemblPlantsGene:AT5G58160 | RefSeq:AT5G58160 | TAIR:AT5G58160 | RefSeq:AT5G58160-TAIR-G | EnsemblPlants:AT5G58160.1 |
| TAIR:AT5G58160.1 | ProteinID:BAA96907.1 | ncoils:Coil | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 |
| RefSeq:NP_001318825.1 | PFAM:PF02181 | PFAM:PF10409 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF190 | InterPro:Prot-tyrosine_phosphatase-like | UniProt:Q9LVN1 | SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 |
| SUPFAM:SSF49562 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI00024BB5BB | SEG:seg |
Description
FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
Coordinates
chr5:+:23533375..23539741
Molecular Weight (calculated)
139736.0 Da
IEP (calculated)
7.324
GRAVY (calculated)
-0.444
Length
1266 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.