Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- plastid 1
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08720 | Canola | mitochondrion | 71.97 | 89.0 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 85.54 | 85.25 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 84.98 | 85.17 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 78.53 | 84.05 |
| CDY37849 | Canola | endoplasmic reticulum | 47.61 | 81.52 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 26.59 | 72.21 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 61.4 | 62.3 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 30.7 | 60.0 |
| PGSC0003DMT400055250 | Potato | vacuole | 58.29 | 59.14 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 58.06 | 58.72 |
| Bra031838.1-P | Field mustard | cytosol | 28.7 | 58.64 |
| KRH28364 | Soybean | vacuole | 58.06 | 58.32 |
| Solyc02g092470.2.1 | Tomato | nucleus | 57.62 | 58.27 |
| KRH04437 | Soybean | plastid, vacuole | 56.95 | 57.92 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 57.17 | 57.82 |
| HORVU4Hr1G069940.1 | Barley | plastid | 35.71 | 55.44 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 53.06 | 55.02 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 53.73 | 54.82 |
| Os03t0204100-01 | Rice | plasma membrane | 47.39 | 47.76 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 46.72 | 47.4 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 46.83 | 47.3 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 46.61 | 46.71 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 46.38 | 46.7 |
| Zm00001d028089_P001 | Maize | plasma membrane | 44.61 | 45.46 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 41.49 | 44.67 |
| Zm00001d048142_P001 | Maize | plasma membrane | 42.6 | 44.48 |
| KXG39923 | Sorghum | mitochondrion | 46.05 | 44.0 |
| Zm00001d032545_P001 | Maize | plasma membrane | 41.27 | 43.19 |
| KXG38231 | Sorghum | plastid | 42.71 | 42.57 |
| HORVU1Hr1G077850.2 | Barley | mitochondrion | 33.26 | 41.82 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 37.26 | 41.67 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 35.71 | 41.47 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 35.93 | 41.25 |
| Zm00001d021985_P001 | Maize | plasma membrane | 36.26 | 41.11 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 39.04 | 41.05 |
| TraesCS2A01G193700.1 | Wheat | golgi | 35.82 | 41.02 |
| EER97466 | Sorghum | plasma membrane | 36.04 | 40.81 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 35.37 | 40.41 |
| AT3G25493.1 | Thale cress | vacuole | 7.12 | 40.0 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 36.37 | 39.21 |
| TraesCS1D01G329400.1 | Wheat | plastid | 36.04 | 38.85 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 36.82 | 37.02 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.6 | 35.59 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 28.14 | 32.35 |
| AT3G07540.1 | Thale cress | plasma membrane | 28.92 | 30.92 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 30.14 | 30.66 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 25.25 | 29.87 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 29.7 | 29.67 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 16.35 | 27.74 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 14.24 | 27.47 |
| AT3G32400.2 | Thale cress | cytosol | 13.68 | 24.85 |
| AT5G07780.1 | Thale cress | plastid | 11.79 | 22.84 |
| AT1G59910.1 | Thale cress | nucleus | 22.69 | 21.96 |
| AT5G07770.3 | Thale cress | plastid | 12.68 | 15.64 |
| AT2G25050.1 | Thale cress | cytosol | 18.91 | 14.55 |
| AT1G31810.1 | Thale cress | cytosol | 19.8 | 14.47 |
| AT1G42980.1 | Thale cress | cytosol | 4.78 | 14.38 |
| AT5G58160.1 | Thale cress | cytosol | 18.58 | 13.19 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 11.79 | 12.23 |
| AT5G07650.1 | Thale cress | cytosol | 10.46 | 11.53 |
| AT5G07740.2 | Thale cress | nucleus | 19.24 | 10.28 |
| AT3G32420.1 | Thale cress | cytosol | 0.67 | 5.61 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | EntrezGene:836883 | ProteinID:AED98348.1 | ArrayExpress:AT5G67470 | EnsemblPlantsGene:AT5G67470 |
| RefSeq:AT5G67470 | TAIR:AT5G67470 | RefSeq:AT5G67470-TAIR-G | EnsemblPlants:AT5G67470.1 | TAIR:AT5G67470.1 | Symbol:ATFH6 |
| EMBL:AY337456 | Unigene:At.26995 | ProteinID:BAB08455.1 | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005819 | GO:GO:0005856 | GO:GO:0005886 |
| GO:GO:0009524 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030312 | InterPro:IPR015425 | RefSeq:NP_201548.1 |
| PFAM:PF02181 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | UniProt:Q9FJX6 |
| SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000A20CD | SEG:seg |
Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
Coordinates
chr5:+:26926551..26930556
Molecular Weight (calculated)
98655.0 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.589
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.