Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35941 | Canola | plastid | 65.28 | 73.3 |
| Bra029655.1-P | Field mustard | cytosol | 26.4 | 73.27 |
| CDY28040 | Canola | plastid | 66.11 | 72.21 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 60.88 | 70.91 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 59.22 | 69.85 |
| Bra001256.1-P | Field mustard | plastid | 31.39 | 69.29 |
| Bra012246.1-P | Field mustard | cytosol | 13.91 | 59.69 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 50.42 | 54.22 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 19.98 | 39.07 |
| PGSC0003DMT400056393 | Potato | cytosol | 21.76 | 38.12 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 24.38 | 36.41 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 17.6 | 33.71 |
| Os01t0897700-01 | Rice | cytosol | 9.39 | 32.38 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 26.99 | 31.4 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 5.71 | 31.37 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 33.77 | 31.24 |
| KRH47952 | Soybean | cytosol | 28.54 | 30.93 |
| GSMUA_Achr10P... | Banana | plastid | 28.78 | 30.14 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 23.9 | 29.96 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 29.85 | 29.92 |
| Zm00001d021173_P001 | Maize | plasma membrane | 26.64 | 29.4 |
| TraesCS1B01G059400.1 | Wheat | plastid | 19.5 | 29.13 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 30.92 | 28.92 |
| TraesCS1D01G010200.1 | Wheat | plastid | 19.5 | 28.87 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 26.99 | 28.81 |
| Solyc06g082910.2.1 | Tomato | extracellular | 31.99 | 28.74 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 32.1 | 28.6 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 36.62 | 28.54 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 26.64 | 28.5 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 26.64 | 28.46 |
| TraesCS5A01G304700.1 | Wheat | golgi | 26.52 | 28.34 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 34.72 | 28.1 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.73 | 27.96 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 34.48 | 27.59 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 30.8 | 27.55 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 33.89 | 27.48 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 27.59 | 27.29 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 30.68 | 27.19 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 30.68 | 27.04 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 30.56 | 27.02 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 30.44 | 26.92 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 26.75 | 26.72 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 30.32 | 26.67 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 16.77 | 26.45 |
| HORVU1Hr1G002300.8 | Barley | plastid | 22.71 | 26.38 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 29.61 | 26.16 |
| AT3G25493.1 | Thale cress | vacuole | 4.88 | 25.62 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 22.83 | 23.13 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 22.83 | 22.88 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 20.57 | 22.76 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 20.45 | 21.0 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 21.88 | 20.81 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 29.61 | 20.77 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 12.49 | 19.81 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 20.69 | 19.33 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 10.34 | 18.67 |
| AT3G32400.2 | Thale cress | cytosol | 10.58 | 17.98 |
| AT1G42980.1 | Thale cress | cytosol | 6.06 | 17.06 |
| AT1G59910.1 | Thale cress | nucleus | 18.55 | 16.79 |
| AT5G07780.1 | Thale cress | plastid | 8.92 | 16.16 |
| AT5G07770.3 | Thale cress | plastid | 10.23 | 11.8 |
| AT2G25050.1 | Thale cress | cytosol | 15.22 | 10.96 |
| AT1G31810.1 | Thale cress | cytosol | 15.7 | 10.73 |
| Zm00001d035757_P003 | Maize | plasma membrane | 21.05 | 10.52 |
| AT5G58160.1 | Thale cress | cytosol | 15.58 | 10.35 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 9.75 | 9.46 |
| AT5G07650.1 | Thale cress | cytosol | 8.92 | 9.2 |
| AT5G07740.2 | Thale cress | nucleus | 14.27 | 7.13 |
| AT3G32420.1 | Thale cress | cytosol | 0.71 | 5.61 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | EntrezGene:819943 | ProteinID:AAF02158.1 | ProteinID:AEE74558.1 | EMBL:AF446866 |
| ArrayExpress:AT3G07540 | EnsemblPlantsGene:AT3G07540 | RefSeq:AT3G07540 | TAIR:AT3G07540 | RefSeq:AT3G07540-TAIR-G | EnsemblPlants:AT3G07540.1 |
| TAIR:AT3G07540.1 | EMBL:AY050396 | Unigene:At.26581 | ncoils:Coil | InterPro:FH2_Formin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR015425 | RefSeq:NP_566311.1 | PFAM:PF02181 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51444 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | UniProt:Q9SRR2 | SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000A2AA1 | SEG:seg | : | : | : |
Description
FH10Formin-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR2]
Coordinates
chr3:-:2404493..2407634
Molecular Weight (calculated)
93016.4 Da
IEP (calculated)
8.718
GRAVY (calculated)
-0.402
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGLCYVIFI IFSLLSCAFS PLSYASPATF SRRHLLQAPV TDPSTFSPPF FPLYSSTSPP PPPSPPQPLP PPAPTFATFP ANISALVLPR SPKPQTPSRT
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.