Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 23.96 | 75.16 |
| Os01t0897700-01 | Rice | cytosol | 31.25 | 61.48 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 53.96 | 60.23 |
| AT3G25493.1 | Thale cress | vacuole | 19.79 | 59.38 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 52.29 | 57.18 |
| PGSC0003DMT400083315 | Potato | cytosol | 22.08 | 56.99 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 65.83 | 56.13 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 96.25 | 50.83 |
| Bra029655.1-P | Field mustard | cytosol | 31.67 | 50.16 |
| Bra012246.1-P | Field mustard | cytosol | 20.0 | 48.98 |
| Bra001256.1-P | Field mustard | plastid | 36.67 | 46.19 |
| KRH47952 | Soybean | cytosol | 74.58 | 46.13 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 25.83 | 43.36 |
| PGSC0003DMT400067386 | Potato | cytosol | 30.83 | 42.65 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 79.17 | 40.25 |
| PGSC0003DMT400039073 | Potato | cytosol | 22.08 | 39.26 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 54.58 | 39.05 |
| PGSC0003DMT400013717 | Potato | plastid | 63.75 | 35.54 |
| GSMUA_Achr10P... | Banana | plastid | 58.75 | 35.12 |
| PGSC0003DMT400031544 | Potato | cytosol | 32.92 | 34.8 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 56.04 | 34.14 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 53.54 | 34.04 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 73.12 | 33.4 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 73.54 | 33.33 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 65.21 | 33.3 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 74.58 | 33.18 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 54.38 | 33.16 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 54.17 | 33.08 |
| Zm00001d021173_P001 | Maize | plasma membrane | 52.29 | 32.94 |
| TraesCS5A01G304700.1 | Wheat | golgi | 53.96 | 32.91 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 73.75 | 32.9 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 36.46 | 32.83 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 65.21 | 32.74 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 73.96 | 32.54 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 48.96 | 32.5 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 64.38 | 32.49 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 63.54 | 32.14 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 69.38 | 32.05 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 63.33 | 31.97 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 63.33 | 31.93 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 63.33 | 31.87 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 55.42 | 31.59 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 67.71 | 31.34 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 55.42 | 31.29 |
| TraesCS1D01G010200.1 | Wheat | plastid | 36.04 | 30.46 |
| TraesCS1B01G059400.1 | Wheat | plastid | 35.62 | 30.37 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 52.92 | 30.27 |
| PGSC0003DMT400055250 | Potato | vacuole | 55.42 | 30.02 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 54.17 | 29.51 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 64.79 | 25.94 |
| PGSC0003DMT400063143 | Potato | cytosol | 16.67 | 25.48 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 45.83 | 24.44 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 36.04 | 24.26 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 39.17 | 24.04 |
| HORVU1Hr1G002300.8 | Barley | plastid | 36.25 | 24.03 |
| PGSC0003DMT400029052 | Potato | cytosol | 13.54 | 23.55 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 35.21 | 23.41 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 42.29 | 23.31 |
| CDY35941 | Canola | plastid | 36.04 | 23.1 |
| CDX85333 | Canola | plasma membrane | 39.58 | 23.09 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 38.33 | 22.8 |
| CDY28040 | Canola | plastid | 36.46 | 22.73 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 38.12 | 22.68 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 42.29 | 21.99 |
| AT3G07540.1 | Thale cress | plasma membrane | 38.12 | 21.76 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 36.88 | 21.33 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 35.21 | 21.12 |
| PGSC0003DMT400063186 | Potato | plastid | 33.12 | 21.06 |
| PGSC0003DMT400079306 | Potato | cytosol | 17.5 | 20.84 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 36.25 | 20.74 |
| PGSC0003DMT400020452 | Potato | cytosol | 6.67 | 19.39 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 32.92 | 19.29 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 4.17 | 16.26 |
| Zm00001d035757_P003 | Maize | plasma membrane | 33.12 | 9.45 |
| PGSC0003DMT400079305 | Potato | cytosol, mitochondrion, plastid | 4.17 | 2.56 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400056393 | EnsemblPlantsGene:PGSC0003DMG400021912 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 | PGSC:PGSC0003DMG400021912 | SEG:seg |
| SMART:SM00498 | SUPFAM:SSF101447 | UniParc:UPI000295F733 | UniProt:M1BZD9 | MapMan:20.2.2.6.1 | : |
Description
FH protein NFH2 [Source:PGSC_GENE;Acc:PGSC0003DMG400021912]
Coordinates
chr9:-:29069512..29072561
Molecular Weight (calculated)
53889.9 Da
IEP (calculated)
5.766
GRAVY (calculated)
-0.349
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MELPCNKQPI EKIEQSIEGL SSDTGGNNEE TPKPKLKTLH WDKVRASSDR EMVWDQLKSS SFKLDEEMIE SLFIVKTPTL NRKEMTRRPV LPSQSQENRV
101: LDPKKSQNIA ILLRALNVTV EEVCEALLEG NADALGTELL ESLLKMAPSK EEERKLKEYK DDTPFKLGSA EKFLKAVLDI PFAFKRVDAM LYISNFDSEV
201: DYLKKSFETL EAACEELRSN RMFLKLLEAV LKTGNRMNVG TNRGDAHAFK LDTLLKLVDV KGADGKTTLL HFVVQEIIRS EGARLSGGDQ DQQSAMNDDV
301: KCRKLGLQVV SNLSSEVVNI KKAAAMDSEV LHSEVLKLSK GIGNIAEVVR SIEAVGLKES SIERFSESMR RFMKMAEEEI IRLQALESVA MSLVKEITEY
401: FHGNSAREEA HPFRIFMVVR DFLMVLDRVC KEVGMINERT IVSSAHKFPV PVNPNLQPAI SGLAAKWQHS SSDEDSSSAH
101: LDPKKSQNIA ILLRALNVTV EEVCEALLEG NADALGTELL ESLLKMAPSK EEERKLKEYK DDTPFKLGSA EKFLKAVLDI PFAFKRVDAM LYISNFDSEV
201: DYLKKSFETL EAACEELRSN RMFLKLLEAV LKTGNRMNVG TNRGDAHAFK LDTLLKLVDV KGADGKTTLL HFVVQEIIRS EGARLSGGDQ DQQSAMNDDV
301: KCRKLGLQVV SNLSSEVVNI KKAAAMDSEV LHSEVLKLSK GIGNIAEVVR SIEAVGLKES SIERFSESMR RFMKMAEEEI IRLQALESVA MSLVKEITEY
401: FHGNSAREEA HPFRIFMVVR DFLMVLDRVC KEVGMINERT IVSSAHKFPV PVNPNLQPAI SGLAAKWQHS SSDEDSSSAH
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.