Factsheet for Zm00001d042506_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88036	Sorghum	extracellular, plasma membrane	92.36	93.94
Zm00001d012158_P001	Maize	extracellular, plasma membrane	89.02	89.48
Os01t0897700-01	Rice	cytosol	22.38	87.7
HORVU3Hr1G089510.1	Barley	plasma membrane	77.3	77.71
TraesCS3B01G429900.1	Wheat	plasma membrane	77.41	77.57
TraesCS3A01G397900.1	Wheat	plasma membrane	76.88	77.45
TraesCS3D01G391800.1	Wheat	mitochondrion	72.8	73.11
PGSC0003DMT400056393	Potato	cytosol	32.74	65.21
GSMUA_Achr5P25760_001	Banana	mitochondrion	28.87	62.87
VIT_00s0227g00200.t01	Wine grape	cytosol	10.04	62.75
AT3G25493.1	Thale cress	vacuole	8.89	53.12
VIT_05s0094g00920.t01	Wine grape	nucleus	49.37	50.75
KRH47952	Soybean	cytosol	39.85	49.1
Bra029655.1-P	Field mustard	cytosol	15.17	47.85
Bra012246.1-P	Field mustard	cytosol	9.73	47.45
Solyc06g082910.2.1	Tomato	extracellular	45.92	46.9
KRH71295	Soybean	vacuole	42.47	46.14
PGSC0003DMT400013717	Potato	plastid	41.53	46.11
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	45.5	46.08
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	43.51	45.76
KRH50174	Soybean	vacuole	42.36	45.2
Solyc12g019480.1.1	Tomato	nucleus	41.74	44.93
Bra001256.1-P	Field mustard	plastid	17.78	44.62
Solyc08g014430.2.1	Tomato	nucleus	35.25	44.52
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	35.15	44.5
CDX79799	Canola	mitochondrion, plastid, vacuole	36.3	43.7
Zm00001d021173_P001	Maize	plasma membrane	34.73	43.57
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	38.39	42.82
CDX83457	Canola	golgi, plasma membrane, vacuole	37.76	42.82
CDY17909	Canola	golgi, vacuole	37.97	42.81
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	47.18	41.8
CDY44259	Canola	plasma membrane, vacuole	36.82	41.76
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	38.49	41.16
Zm00001d028089_P001	Maize	plasma membrane	37.97	41.16
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	44.67	40.63
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	35.77	40.62
Zm00001d021985_P001	Maize	plasma membrane	33.68	40.61
Zm00001d048142_P001	Maize	plasma membrane	36.51	40.53
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.77	40.42
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	37.76	40.34
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.29	40.24
KRH00989	Soybean	extracellular, golgi, vacuole	43.72	40.23
Zm00001d013926_P001	Maize	extracellular, plasma membrane	34.94	40.0
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.4	39.78
KRH40232	Soybean	endoplasmic reticulum, extracellular	43.1	39.73
Zm00001d032545_P001	Maize	plasma membrane	35.04	39.0
AT5G48360.1	Thale cress	extracellular, vacuole	28.03	34.27
CDY35941	Canola	plastid	26.46	33.78
CDX74041	Canola	golgi, plasma membrane, plastid	25.1	33.66
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.24	33.46
CDX86310	Canola	endoplasmic reticulum, plasma membrane	28.14	33.33
CDX85333	Canola	plasma membrane	28.56	33.17
CDY07990	Canola	golgi, plasma membrane, plastid	24.9	32.96
CDY28040	Canola	plastid	26.36	32.73
Zm00001d030781_P001	Maize	cytosol	3.66	32.71
AT3G07540.1	Thale cress	plasma membrane	26.67	30.32
Zm00001d003406_P002	Maize	plasma membrane	26.67	30.32
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	25.42	26.36
Zm00001d032225_P001	Maize	golgi	24.48	26.23
Zm00001d017983_P001	Maize	plasma membrane	25.0	25.95
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	24.58	24.84
Zm00001d024947_P005	Maize	plasma membrane	24.69	23.53
Zm00001d015326_P003	Maize	mitochondrion, plastid	23.95	22.63
Zm00001d030780_P001	Maize	cytosol	3.03	16.29
Zm00001d035757_P003	Maize	plasma membrane	25.21	14.32
Zm00001d050024_P001	Maize	cytosol	17.26	11.9
Zm00001d018371_P001	Maize	cytosol	16.21	10.96
Zm00001d006758_P003	Maize	cytosol	15.69	9.25
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	15.59	8.77
Zm00001d032101_P001	Maize	cytosol	6.17	8.66
Zm00001d041515_P003	Maize	mitochondrion	16.95	7.57
Zm00001d017027_P001	Maize	cytosol	1.67	6.69
Zm00001d030782_P001	Maize	mitochondrion	12.87	6.02
Zm00001d045102_P001	Maize	cytosol	2.72	4.02

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100192542	MapMan:20.2.2.6.1	UniProt:A0A1D6N4N1	InterPro:FH2_Formin	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR015425	ProteinID:ONM35602.1	PFAM:PF02181	PRINTS:PR01217
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000843FEE3	EnsemblPlantsGene:Zm00001d042506	EnsemblPlants:Zm00001d042506_P002	EnsemblPlants:Zm00001d042506_T002	SEG:seg

Description

Formin-like protein 1

Coordinates

chr3:+:170090755..170094686

Molecular Weight (calculated)

102825.0 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.431

Length

956 amino acids

Sequence
(BLAST)

001: MPSPRQFLQL LLPTLLATCC VDGANGPHAP ATARRQLHQP FFVPDQPGQP SAPPPFFPAI PVTPPPPVPT GQDQPTYPAL VFPSNGSSGA TPPAGNSHGS
101: KKSSKLVPAI LLPLLTVAVL GLSIAFFFSH RRRNAARGGG GGCVGGGDAK FLHPERTSLF ARDEFGGSGG GGVREAAPAP APASATSAEF LYVGTLASRA
201: DERSSDTTSS GDEVSRSSGG SPELRPLPPL ARQCAPAPSR SPGAASPSSG EEEFYSPRGS STKTSSSRRT LATAVQAALE ARDRSRTPSP GSVLSTPSYP
301: SSPGATLSPA PASPPAFSSP GESGRRSVKS RSESARVVVL PPVPPTPPPP PPFAPTLPPP PPPRRKPPSP SPPCSPLNDK PALRSSTDTI ERNPFAQPPS
401: LPTSTHPPRP PPAAGPPPPP PPPPPPPVGY WESRVRKPDT SKETRSPALS PPSFRSVPAP TDAFPSWLPE SSEQGDKSED TTPRPKLKPL HWDKVRASSD
501: RVMVWDQLKS SSFQCFSCSW SVSLQVPLNS RRVNEEMIET LFICNPANAP AKEATRRPVL PTPKAENKVL DPKKAQNIAI LLRALNVTKE EVSDALCEGN
601: TENFGADLLE TLLKMAPTKE EEIKLREFKE ESSPVKLNPA EKFLKAVLDV PFAFKRVDAM LYIANFDAEV NYLKKSFETL EAACDELRSS RLFLKLLEAV
701: LKTGNRMNVG TNRGDAHAFK LDTLLKLVDV KGTDGHTTLL HFVVQEMIRT EGARVSASTQ TTPRTQANPL REELECKRLG LRVVGGLASE LGNVKKAAAM
801: DSDVLSSYVA KLAGGIEKVT EVLRLNEEVK SRDDAWQFHD RMQRFLKKAD DEIIRVQCQE SVALSLVKEI TEYFHGDSAK EEAHPFRIFM VVRDFLAVLD
901: QVCKEVGRIN ERTIASSARH FPVPVNPMMP QLFPRLHALR AGFSDDESSA ASVSSP

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.