CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79799	Canola	mitochondrion, plastid, vacuole	85.73	91.56
CDX83457	Canola	golgi, plasma membrane, vacuole	73.23	73.67
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	76.77	72.82
CDY44259	Canola	plasma membrane, vacuole	71.34	71.77
GSMUA_Achr11P...	Banana	mitochondrion, plastid	29.01	57.21
GSMUA_Achr5P25760_001	Banana	mitochondrion	27.71	53.53
Os01t0897700-01	Rice	cytosol	14.86	51.64
GSMUA_Achr6P18370_001	Banana	nucleus	33.73	50.8
VIT_05s0094g00920.t01	Wine grape	nucleus	47.76	43.55
PGSC0003DMT400013717	Potato	plastid	44.1	43.44
Solyc12g019480.1.1	Tomato	nucleus	45.4	43.36
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	38.56	43.31
CDX94358	Canola	mitochondrion, plastid	7.9	42.95
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	33.96	42.92
KRH71295	Soybean	vacuole	44.22	42.61
CDY37849	Canola	endoplasmic reticulum	26.3	42.48
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	36.2	42.46
GSMUA_Achr10P...	Banana	plastid	40.09	42.34
Solyc08g014430.2.1	Tomato	nucleus	37.74	42.27
KRH50174	Soybean	vacuole	44.46	42.08
Zm00001d021173_P001	Maize	plasma membrane	37.15	41.34
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	38.21	41.12
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	37.97	40.91
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	37.74	40.71
TraesCS5A01G304700.1	Wheat	golgi	37.62	40.53
CDY08720	Canola	mitochondrion	33.73	39.34
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	38.8	39.21
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	38.33	38.24
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	37.85	38.12
OQU88036	Sorghum	extracellular, plasma membrane	42.22	38.09
Zm00001d042506_P002	Maize	extracellular, plasma membrane	42.81	37.97
Zm00001d012158_P001	Maize	extracellular, plasma membrane	42.33	37.75
CDY43578	Canola	endoplasmic reticulum, extracellular	37.38	37.74
CDY36494	Canola	endoplasmic reticulum, vacuole	39.74	37.36
TraesCS3A01G397900.1	Wheat	plasma membrane	41.16	36.78
TraesCS3D01G391800.1	Wheat	mitochondrion	41.27	36.76
HORVU3Hr1G089510.1	Barley	plasma membrane	41.04	36.59
TraesCS3B01G429900.1	Wheat	plasma membrane	41.04	36.48
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.52	36.45
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.11	36.34
TraesCS1D01G010200.1	Wheat	plastid	23.0	34.33
TraesCS1B01G059400.1	Wheat	plastid	22.52	33.93
CDY70125	Canola	cytosol	18.87	33.33
TraesCS1A01G011800.1	Wheat	extracellular	20.4	32.46
CDY35941	Canola	plastid	28.18	31.91
HORVU1Hr1G002300.8	Barley	plastid	27.12	31.77
CDX74041	Canola	golgi, plasma membrane, plastid	26.42	31.42
CDY28040	Canola	plastid	28.3	31.17
CDY07990	Canola	golgi, plasma membrane, plastid	26.53	31.16
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	30.42	31.08
CDY05170	Canola	extracellular, golgi, plasma membrane	26.89	30.6
CDY22934	Canola	nucleus, plastid	25.71	29.9
CDX85333	Canola	plasma membrane	29.01	29.89
CDX86310	Canola	endoplasmic reticulum, plasma membrane	28.3	29.74
CDY27766	Canola	golgi, plasma membrane, vacuole	27.83	29.65
GSMUA_Achr7P23740_001	Banana	plastid	41.27	29.19
CDX74146	Canola	extracellular, golgi, plasma membrane	27.24	28.77
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.48	28.52
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	26.77	28.48
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	26.65	28.29
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	27.0	27.96
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	27.48	27.77
CDY42470	Canola	plasma membrane	27.71	27.36
CDY43811	Canola	golgi	27.36	27.2
CDY18346	Canola	plasma membrane	27.95	27.18
CDY43029	Canola	plasma membrane	27.59	27.11
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.65	26.93
CDY53556	Canola	nucleus	26.77	26.86
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	24.06	25.76
CDY16239	Canola	vacuole	21.23	25.64
CDY31597	Canola	mitochondrion	18.75	25.0
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	18.28	24.68
CDY55061	Canola	mitochondrion, nucleus	21.11	24.06
CDY33614	Canola	mitochondrion, nucleus	21.11	23.25
CDY24501	Canola	mitochondrion, nucleus	21.34	22.37
CDX99029	Canola	cytosol	0.35	18.75
CDY27130	Canola	cytosol, mitochondrion	8.61	18.58
Zm00001d035757_P003	Maize	plasma membrane	27.71	13.96
CDY49153	Canola	cytosol	16.27	13.17
CDY40774	Canola	cytosol	14.15	12.89
CDX76779	Canola	cytosol	16.75	12.71
CDY34742	Canola	cytosol	16.63	12.56
CDX99025	Canola	cytosol	17.22	12.52
CDY12361	Canola	cytosol	16.51	12.48
CDY14029	Canola	cytosol	17.22	11.86
CDX69994	Canola	plastid	16.51	11.79
CDY12294	Canola	cytosol	16.86	11.73
CDY02799	Canola	cytosol	16.16	10.95
CDY32721	Canola	cytosol	16.04	10.93
CDY62689	Canola	cytosol	16.63	10.91
CDX69993	Canola	cytosol	14.74	10.3
CDY43877	Canola	cytosol	15.33	9.86
CDX81069	Canola	nucleus	16.86	9.85
CDX78309	Canola	nucleus	17.22	9.75
CDX99026	Canola	cytosol	14.39	9.6
CDY02798	Canola	cytosol	4.25	7.35
CDX69992	Canola	cytosol	6.37	7.13
CDX99027	Canola	nucleus	4.83	4.75

Protein Annotations

EnsemblPlants:CDY17909	EnsemblPlantsGene:GSBRNA2T00002255001	GO:A0A078FXL3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181	PFscan:PS51444
ProteinID:CDY17909	ProteinID:CDY17909.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498	SUPFAM:SSF101447
TMHMM:TMhelix	UniParc:UPI0004EED438	UniProt:A0A078FXL3	MapMan:20.2.2.6.1	:	:

Description

BnaC04g03100DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXL3]

Coordinates

chrLK032079:-:426089..429057

Molecular Weight (calculated)

93224.0 Da

IEP (calculated)

8.351

GRAVY (calculated)

-0.578

Length

848 amino acids

Sequence
(BLAST)

001: MSRIPFFLRF ATILFLFSSS SSADERLHSR HLLHQPFFPI TTAAPPPYQP TPSSSEPPSP SPRSHHHHKN HPETPPPHEK HPFSSASNPP PPPPPSPPHS
101: NTFFPSSDPS SPTSHPPPSP PPPPHRASLP TFPANISSLV FPTHNKPHNS NPHVAKLLAI TIAVVSAAIL LSLLAVVTTF LRRHRRRASP ADDAKSTKSD
201: ARHLFNAAPS DVPLKHKHPP KYTSSNTSSE FLYLGTLVNS GLVDQQKSPS VAGVLDLPPA QDSSSSTPSS SSYSQYQKLG SPELRPLPPL PKLPVYTPNY
301: RSTELLNPKG QDFDGDDNEN DEFYSPRGSP GRKQSPPRVK KPPKSSLSPS LSLNSSNGSV SKKPVPTRPP PPPPPQQIHV LPATNSDSEK KEETLKPKLK
401: PLHWDKVRAS SSRVTVWDQI KSNSFQVNEE MIETLFRAND PTSRTKESVT TDVVHSKSQF LDPRKSHNIA ILLRALNVTA DEVCEALVEG NSDALGSELL
501: QCLLKMAPTK EEEDKLKELK GDDDESSPSK TGPAERFLRA LLNIPLAFKR INAMLYIVNF ESETEYLKRS FHTLEAACGE LKNTRMFLKL LEAVLKTGNR
601: MNIGTNRGDA HAFKLDTLLK LVDIKGADGK TTLLHFVVQE IIKSEGARVS TTPTQRPMGD NIAAFQDDLE LKKLGLQVVS GLSSQLTNVK KAAAMDSTSL
701: SDEAAELSRG ITSVKEVIME LKQETGVERF LDSMNSFLSK AEKEITEMQS HGDNVLKMVK EVTEYFHGNS ESHPSRIFTV VRDFLTVLDQ VCKEVGRVNE
801: RTVYGSVPRA SASNQVVTPL FPVANNDNNS EKSHSGSLGN EQDDEDLF

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.