CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020386.1-P	Field mustard	cytosol	84.49	90.79
CDX99029	Canola	cytosol	2.04	62.5
Solyc07g005500.2.1	Tomato	cytosol	48.16	42.68
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	39.59	41.99
KRH03523	Soybean	cytosol	40.82	28.13
CDY32721	Canola	cytosol	66.73	26.29
CDY02799	Canola	cytosol	66.94	26.22
CDX69992	Canola	cytosol	38.16	24.7
CDY62689	Canola	cytosol	65.1	24.69
CDY43877	Canola	cytosol	63.27	23.52
KRH63288	Soybean	cytosol	43.06	22.3
CDX76779	Canola	cytosol	46.53	20.41
CDY40774	Canola	cytosol	38.78	20.41
CDY34742	Canola	cytosol	46.53	20.3
CDY49153	Canola	cytosol	37.96	17.75
CDX99027	Canola	nucleus	31.22	17.73
CDY12361	Canola	cytosol	40.2	17.56
CDY14029	Canola	cytosol	42.86	17.06
CDX99025	Canola	cytosol	40.41	16.98
CDX69994	Canola	plastid	40.82	16.85
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	45.51	16.78
CDY12294	Canola	cytosol	41.63	16.73
KRH56878	Soybean	cytosol	40.61	16.49
GSMUA_Achr6P16780_001	Banana	cytosol	39.39	16.45
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	34.49	15.62
KRH54596	Soybean	extracellular	40.82	15.54
Os04t0245000-00	Rice	plasma membrane	37.35	14.41
CDX81069	Canola	nucleus	42.65	14.39
CDX78309	Canola	nucleus	43.47	14.23
CDX69993	Canola	cytosol	35.1	14.18
CDX99026	Canola	cytosol	35.1	13.53
Os07t0596300-02	Rice	plastid	40.2	12.11
OQU90190	Sorghum	cytosol	40.41	12.06
Zm00001d006758_P003	Maize	cytosol	38.78	11.72
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	40.41	11.65
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	40.41	11.34
HORVU5Hr1G020180.51	Barley	mitochondrion	38.57	9.69
Zm00001d041515_P003	Maize	mitochondrion	38.16	8.74
KXG23793	Sorghum	cytosol	35.31	8.58
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	6.53	5.1
CDY43578	Canola	endoplasmic reticulum, extracellular	8.57	5.0
CDY18346	Canola	plasma membrane	8.57	4.82
CDY42470	Canola	plasma membrane	8.37	4.77
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	7.76	4.76
CDX74146	Canola	extracellular, golgi, plasma membrane	7.76	4.73
CDY36494	Canola	endoplasmic reticulum, vacuole	8.57	4.66
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	7.76	4.65
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	7.55	4.64
CDY53556	Canola	nucleus	7.96	4.62
CDY05170	Canola	extracellular, golgi, plasma membrane	6.94	4.56
CDY16239	Canola	vacuole	6.33	4.42
CDY43029	Canola	plasma membrane	7.76	4.4
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	9.59	4.37
KRH03521	Soybean	plastid	5.92	4.28
CDY27766	Canola	golgi, plasma membrane, vacuole	6.94	4.27
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	9.18	4.25
CDY17909	Canola	golgi, vacuole	7.35	4.25
CDY43811	Canola	golgi	7.35	4.22
CDX79799	Canola	mitochondrion, plastid, vacuole	6.73	4.16
CDX83457	Canola	golgi, plasma membrane, vacuole	7.14	4.15
CDY44259	Canola	plasma membrane, vacuole	7.14	4.15
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	6.53	4.12
CDY28040	Canola	plastid	6.33	4.03
CDY35941	Canola	plastid	6.12	4.01
CDY22934	Canola	nucleus, plastid	5.92	3.98
CDX85333	Canola	plasma membrane	6.53	3.89
CDX86310	Canola	endoplasmic reticulum, plasma membrane	6.33	3.84
CDX74041	Canola	golgi, plasma membrane, plastid	5.51	3.79
CDY07990	Canola	golgi, plasma membrane, plastid	5.31	3.6
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	5.31	3.28
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	2.86	2.88
CDY08720	Canola	mitochondrion	4.08	2.75
CDY55061	Canola	mitochondrion, nucleus	3.47	2.28
Solyc03g115680.2.1	Tomato	plastid	2.04	1.92
CDY37849	Canola	endoplasmic reticulum	2.04	1.9
CDY24501	Canola	mitochondrion, nucleus	2.86	1.73
Zm00001d030780_P001	Maize	cytosol	0.41	1.12
CDY31597	Canola	mitochondrion	1.43	1.1
CDY33614	Canola	mitochondrion, nucleus	1.63	1.04
CDY27130	Canola	cytosol, mitochondrion	0.41	0.51
CDY70125	Canola	cytosol	0.41	0.42
CDX94358	Canola	mitochondrion, plastid	0.0	0.0
PGSC0003DMT400063143	Potato	cytosol	0.0	0.0
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	0.0	0.0
TraesCS5D01G089100.1	Wheat	cytosol	0.0	0.0
Zm00001d030781_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY02798	EnsemblPlantsGene:GSBRNA2T00114973001	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:IPR014020	InterPro:IPR029021
InterPro:IPR029023	InterPro:Prot-tyrosine_phosphatase-like	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190
PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	ProteinID:CDY02798	ProteinID:CDY02798.1	SEG:seg
SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799	UniParc:UPI0004EF24AA	MapMan:35.1	:

Description

BnaC02g10910D

Coordinates

chrLK031937:+:499820..502118

Molecular Weight (calculated)

55262.5 Da

IEP (calculated)

5.819

GRAVY (calculated)

-0.302

Length

490 amino acids

Sequence
(BLAST)

001: MDLLRKLFNR KTPDGLHEIC DQVFVFGSCL STDSLEEENY KTYLTGAVNQ LQEHFPDASS LVFNFRDVVD TRSVMADVLS EHGLTVMDYP RHYQGCSLLP
101: VKVMKKYLCY CDSWLSLGPS KLILLHCERG AWPVLAFMLA ALLIYRKQYS DEYKTLDMIC KKAPVELMHL FSPLNPIPSQ LRYLQYVSRR TMVSEWPPTE
201: RALTVDCVML RCLPDVSGQG SFLRPVFRVY GQDPLFVDDD KKKPELLYSS AKKGKHLKIY KQLFSNKVEL VKIDDINCHV QGDIVIECLS NDMEVMMFRA
301: VFNTAFIRSN ILTLNRDEVD TLWDIKEQFP KGFGVEILFS DMDDDSSVDL TEKVGLPVEA FSNVHEFFNP TDWDDATRNT RQHLAIANGV QEIPDGKSSP
401: VLQGLSPPTG APNDVASLLG QPVKSPPPVS KSDKTTALPR PPPPPPPPPP PPPVQHSDQK TAARDPRPLD APLRITDKDP NATGKMMECF

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.