CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029012.1-P	Field mustard	plasma membrane	96.48	95.81
CDY43029	Canola	plasma membrane	96.48	95.36
CDY18346	Canola	plasma membrane	79.48	77.75
CDY42470	Canola	plasma membrane	78.19	77.65
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	81.48	77.22
PGSC0003DMT400083315	Potato	cytosol	15.94	73.12
PGSC0003DMT400036575	Potato	mitochondrion	22.16	66.08
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	36.81	62.93
PGSC0003DMT400039073	Potato	cytosol	17.82	56.3
CDX94358	Canola	mitochondrion, plastid	9.96	54.49
PGSC0003DMT400031544	Potato	cytosol	28.72	53.96
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	30.72	52.72
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	36.58	48.07
CDY22934	Canola	nucleus, plastid	39.74	46.5
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	47.24	46.27
Solyc07g064010.2.1	Tomato	golgi	47.13	45.22
Solyc10g006540.2.1	Tomato	extracellular	49.24	45.02
KRH27118	Soybean	plasma membrane	46.42	43.85
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	40.68	43.54
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	45.96	43.22
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	40.45	43.18
CDY53556	Canola	nucleus	41.5	41.89
KRH25896	Soybean	plasma membrane	47.36	41.52
KRH55607	Soybean	plasma membrane	47.6	41.51
Os04t0100300-00	Rice	plasma membrane	37.63	39.0
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	41.15	38.7
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	40.45	37.42
Os07t0545500-01	Rice	plasma membrane	40.56	37.24
GSMUA_Achr2P14090_001	Banana	mitochondrion	28.96	37.14
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	41.15	37.1
TraesCS6B01G163200.1	Wheat	plasma membrane	36.69	37.09
CDY70125	Canola	cytosol	20.87	37.08
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.81	36.94
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	36.11	36.84
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.69	36.82
EES10325	Sorghum	golgi	41.5	36.72
CDY37849	Canola	endoplasmic reticulum	22.39	36.38
Os02t0161100-01	Rice	golgi	36.81	35.64
TraesCS2B01G239500.1	Wheat	plasma membrane	38.57	34.96
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.57	34.78
Zm00001d024947_P005	Maize	plasma membrane	40.8	34.7
EES04559	Sorghum	plasma membrane	34.58	34.54
TraesCS2D01G220300.1	Wheat	plasma membrane	37.98	33.86
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	39.98	33.24
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	40.09	32.95
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	40.09	32.63
CDY08720	Canola	mitochondrion	27.67	32.46
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	38.57	32.0
CDY43578	Canola	endoplasmic reticulum, extracellular	30.01	30.48
CDY05170	Canola	extracellular, golgi, plasma membrane	26.49	30.34
CDY27766	Canola	golgi, plasma membrane, vacuole	27.55	29.52
Zm00001d015326_P003	Maize	mitochondrion, plastid	34.7	29.25
CDX79799	Canola	mitochondrion, plastid, vacuole	27.2	29.22
CDY36494	Canola	endoplasmic reticulum, vacuole	30.72	29.05
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.38	28.99
CDX74146	Canola	extracellular, golgi, plasma membrane	27.08	28.77
CDY44259	Canola	plasma membrane, vacuole	28.14	28.47
CDX83457	Canola	golgi, plasma membrane, vacuole	28.14	28.47
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.2	28.4
CDY16239	Canola	vacuole	23.33	28.35
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	26.14	28.16
CDY31597	Canola	mitochondrion	20.87	27.99
CDY55061	Canola	mitochondrion, nucleus	24.38	27.96
CDY17909	Canola	golgi, vacuole	27.2	27.36
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	20.05	27.23
CDY33614	Canola	mitochondrion, nucleus	23.45	25.97
CDY24501	Canola	mitochondrion, nucleus	24.15	25.46
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.83	24.83
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.95	24.54
CDY35941	Canola	plastid	19.7	22.43
CDY28040	Canola	plastid	20.16	22.34
CDX86310	Canola	endoplasmic reticulum, plasma membrane	20.87	22.06
CDX74041	Canola	golgi, plasma membrane, plastid	18.41	22.02
CDY07990	Canola	golgi, plasma membrane, plastid	18.52	21.88
CDX85333	Canola	plasma membrane	20.98	21.75
CDY27130	Canola	cytosol, mitochondrion	9.14	19.85
HORVU2Hr1G006690.1	Barley	peroxisome	15.94	15.58
CDY12361	Canola	cytosol	18.29	13.9
CDX99025	Canola	cytosol	18.29	13.38
CDX76779	Canola	cytosol	17.23	13.16
CDY40774	Canola	cytosol	14.3	13.1
CDY14029	Canola	cytosol	18.87	13.08
CDY34742	Canola	cytosol	17.0	12.91
CDY32721	Canola	cytosol	18.52	12.7
CDY49153	Canola	cytosol	15.59	12.69
CDX69994	Canola	plastid	17.59	12.64
CDY02799	Canola	cytosol	18.41	12.55
CDX99029	Canola	cytosol	0.23	12.5
CDY62689	Canola	cytosol	18.52	12.23
CDY12294	Canola	cytosol	17.12	11.98
CDY43877	Canola	cytosol	17.35	11.23
CDX69993	Canola	cytosol	15.71	11.05
CDX81069	Canola	nucleus	18.64	10.95
CDX99026	Canola	cytosol	16.3	10.94
CDX78309	Canola	nucleus	19.11	10.89
CDX69992	Canola	cytosol	6.57	7.4
CDY02798	Canola	cytosol	4.22	7.35
CDX99027	Canola	nucleus	4.45	4.4

Protein Annotations

EnsemblPlants:CDY43811	EnsemblPlantsGene:GSBRNA2T00077319001	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF195
PFAM:PF02181	PFscan:PS51444	ProteinID:CDY43811	ProteinID:CDY43811.1	SEG:seg	SignalP:SignalP-noTM
SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0004EDBD9D	UniProt:A0A078I1X0	MapMan:20.2.2.6.1

Description

BnaC03g14440DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1X0]

Coordinates

chrLK032569:+:16130..19046

Molecular Weight (calculated)

93067.3 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.436

Length

853 amino acids

Sequence
(BLAST)

001: MIRGGGMCNQ NWARLVLWLV LLSGFFLVIA LAQSSEKDET FVSQFMAPST GHVNEQMVQT LWTHRCWQDP DCVKEAVTVF NLCFPGSKDN NLELFGFTPS
101: HLKQTLLNCI QEQGELNGHN LNHLNKLLPS ILDNAPRRNL ASTPSPSPPP KRSSRRPPPP PPASKKSVSE KLASKPASSA KGIEDHQKTI IIAVVTTAVS
201: TFLLAACLFL CCTKVCGKGS GRRINDERPL LSLSSNEYSL GSSNNYGGSG KGHQSFNGNN SDNFVTLEER MSQDGMFSTI SNSHGIPPLK APPGRKSSKI
301: SWKPPSGKVE PLPPEPPKFL KVSSSKKSSP SPPPPPMPSS AGPPAPPPGS GGPKPPPPPG PKGPRPPPPM SRGPKAPPAS SGPASSGDDD APKTKLKPFF
401: WDKVQANPEQ SMVWNDIRSG SFQFNEEMIE SLFGYAAADK NKNDKKGGSG QAALPQFIQI LEPKKGQNLS ILLRALNATT EEVCDALLEG NELPVEFIQT
501: LLKMAPTPEE ELKLRLYSGE IAQLGTAERF LKAVVDIPFA FKRLEALLFM CTLHEEMAFV KESFQTLEIA CQELRGSRLF LKLLEAVLKT GNRMNDGTFR
601: GAAQAFKLDT LLKLADVKGT DGKTTLLHFV VQEIIRTEGR RAARTIRESQ SFSSVKTEDL MAEETSEEME ENYRGLGLQK VSGLSSELEH VKKSANVDAD
701: SLTGTVLKMG HALAKAREFV NSEIKSSDEE SGFREALEDF IQNAEGSVVE ILEEEKRIMA LVKATGDYFH GKAGKDEGLR LFVIVRDFLI ILDKSCKEVR
801: EAKGKQVKMA RKQGSTASSV ASEIPRAPSL DPREKLFPAI TERRVDQSSS DSD

Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Arabidopsis Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [mitochondrion,plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.