Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 94.82 | 95.5 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 95.06 | 95.06 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 83.53 | 84.93 |
| Os02t0161100-01 | Rice | golgi | 74.0 | 71.4 |
| EES04559 | Sorghum | plasma membrane | 69.65 | 69.32 |
| PGSC0003DMT400083315 | Potato | cytosol | 14.24 | 65.05 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 69.18 | 58.1 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 31.41 | 53.51 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 18.0 | 53.5 |
| PGSC0003DMT400067386 | Potato | cytosol | 21.65 | 53.03 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 29.65 | 50.7 |
| CDX94358 | Canola | mitochondrion, plastid | 8.94 | 48.72 |
| PGSC0003DMT400039073 | Potato | cytosol | 15.41 | 48.52 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 33.88 | 44.38 |
| PGSC0003DMT400031544 | Potato | cytosol | 22.47 | 42.07 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 36.24 | 38.45 |
| Bra029012.1-P | Field mustard | plasma membrane | 37.18 | 36.79 |
| CDY43811 | Canola | golgi | 36.82 | 36.69 |
| CDY43029 | Canola | plasma membrane | 37.06 | 36.5 |
| CDY42470 | Canola | plasma membrane | 36.59 | 36.2 |
| CDY22934 | Canola | nucleus, plastid | 30.94 | 36.08 |
| CDY18346 | Canola | plasma membrane | 36.59 | 35.67 |
| Bra002969.1-P | Field mustard | plasma membrane | 36.71 | 35.58 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 37.41 | 35.33 |
| Bra037087.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 33.88 | 35.29 |
| Solyc10g006540.2.1 | Tomato | extracellular | 38.47 | 35.05 |
| Bra039561.1-P | Field mustard | golgi | 34.35 | 34.89 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.59 | 34.76 |
| KRH25436 | Soybean | endoplasmic reticulum, golgi, vacuole | 33.88 | 34.7 |
| KRH56076 | Soybean | endoplasmic reticulum | 34.0 | 34.32 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.0 | 34.04 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 36.94 | 34.02 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 36.71 | 33.99 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 34.59 | 33.75 |
| CDY53556 | Canola | nucleus | 32.71 | 32.9 |
| KRH27118 | Soybean | plasma membrane | 34.82 | 32.78 |
| KRH22219 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 34.94 | 32.75 |
| Solyc07g064010.2.1 | Tomato | golgi | 34.24 | 32.73 |
| Solyc07g052730.2.1 | Tomato | golgi | 36.12 | 32.15 |
| KRH25896 | Soybean | plasma membrane | 35.88 | 31.35 |
| KRH55607 | Soybean | plasma membrane | 35.88 | 31.19 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.12 | 30.66 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 15.29 | 27.9 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 17.29 | 27.58 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 33.29 | 27.26 |
| TraesCS5A01G304700.1 | Wheat | golgi | 25.06 | 27.06 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 27.41 | 26.18 |
| TraesCS2A01G193700.1 | Wheat | golgi | 23.06 | 24.97 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 22.94 | 24.25 |
| TraesCS2A01G388800.1 | Wheat | cytosol | 10.71 | 23.82 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 26.35 | 23.6 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 24.59 | 23.02 |
| TraesCS5A01G075500.1 | Wheat | cytosol | 8.12 | 22.55 |
| TraesCS6A01G312000.2 | Wheat | plastid | 23.06 | 21.61 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 9.65 | 20.1 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 17.65 | 10.81 |
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 9.06 | 8.55 |
| TraesCS6A01G357300.1 | Wheat | endoplasmic reticulum, golgi | 3.06 | 7.81 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 2.94 | 7.04 |
| TraesCS2A01G388700.1 | Wheat | cytosol | 3.65 | 6.39 |
| TraesCS7A01G148100.1 | Wheat | mitochondrion | 3.53 | 5.46 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G135200.1 | EnsemblPlantsGene:TraesCS6A01G135200 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF235 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00498 | SUPFAM:SSF101447 | MapMan:20.2.2.6.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:107116321..107119578
Molecular Weight (calculated)
92696.1 Da
IEP (calculated)
6.255
GRAVY (calculated)
-0.392
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGRMGLLVL FVAAVLVGPS RGGGEVDGVH VLPGWTRPPS SSSTSAPPSS LVLDGDLVDK IWSICLQDIV GAEEILGTGQ TFAYEELPSH SSKGELKTML
101: LIELLALLPP DKSSVTHDCI RANYISLGMS QEFINYLEDQ QVLLRSNFYP RRRHLADQMV GDAPSSGGEA RFPLSLTEPP FTPPNSPNTE PRSRHLEDKP
201: AKKRRGVPPP VSPSDKQHNY IKLVLTVVLP TAAFSFIAAF LIFYCCGCNK SKVSVGEPRD DHPLLDMQLA NTPGASPNIR ASSSQLHKDD QGVRASKPGG
301: SMSRCFPCCF KTSTDASTPA QATGGTQNNT SDAPKPMPPP PPPPPPPPPP PPVRKAGPPP PAPPKGSLAR FPQLSPVESS HSEGSSASEQ ASESSEAEVG
401: APRPKLRPFY WNKVLANPNQ SMAWHDIKFG SFHVNEDMIE ALFGYGAGNR NNTKDKELAM ADPSPQHVSL LDFKKSCNLA VVFKAMNVRV EDIQDALIEG
501: NELPRLLLET ILRMKPSDEE ELKLRLYDGD YSQLGLAEQV MKALTDIPFA YKRISALLFM SSLQEDASSL RDSFLQLEAA CGELKHRLFL KLLEAVLKTG
601: NRLNDGTFRG GANAFKLDTL LKLSDVKGAD GKTTLLHFVV QEIIRSEGVR EARLAMESGR TQPSGDDSNG SLQEDGEYYS KLGLKIVSGL SSELVNAKNI
701: AALDADALSA SVLQLRRELL NTKEFLNSDM ETIDENSGFH RSLSRFVEHA ENETNFLLKE EKRLRSLVKK TIRYFHGNDA KDDGFSLFVV VRDFLVMLDK
801: ACKEVGASQK KAASQSRSSG SCNPASQLNP QEKQFPAVLD DHLDSSDSND
101: LIELLALLPP DKSSVTHDCI RANYISLGMS QEFINYLEDQ QVLLRSNFYP RRRHLADQMV GDAPSSGGEA RFPLSLTEPP FTPPNSPNTE PRSRHLEDKP
201: AKKRRGVPPP VSPSDKQHNY IKLVLTVVLP TAAFSFIAAF LIFYCCGCNK SKVSVGEPRD DHPLLDMQLA NTPGASPNIR ASSSQLHKDD QGVRASKPGG
301: SMSRCFPCCF KTSTDASTPA QATGGTQNNT SDAPKPMPPP PPPPPPPPPP PPVRKAGPPP PAPPKGSLAR FPQLSPVESS HSEGSSASEQ ASESSEAEVG
401: APRPKLRPFY WNKVLANPNQ SMAWHDIKFG SFHVNEDMIE ALFGYGAGNR NNTKDKELAM ADPSPQHVSL LDFKKSCNLA VVFKAMNVRV EDIQDALIEG
501: NELPRLLLET ILRMKPSDEE ELKLRLYDGD YSQLGLAEQV MKALTDIPFA YKRISALLFM SSLQEDASSL RDSFLQLEAA CGELKHRLFL KLLEAVLKTG
601: NRLNDGTFRG GANAFKLDTL LKLSDVKGAD GKTTLLHFVV QEIIRSEGVR EARLAMESGR TQPSGDDSNG SLQEDGEYYS KLGLKIVSGL SSELVNAKNI
701: AALDADALSA SVLQLRRELL NTKEFLNSDM ETIDENSGFH RSLSRFVEHA ENETNFLLKE EKRLRSLVKK TIRYFHGNDA KDDGFSLFVV VRDFLVMLDK
801: ACKEVGASQK KAASQSRSSG SCNPASQLNP QEKQFPAVLD DHLDSSDSND
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.