Factsheet for GSMUA_Achr3P23040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	53.77	70.22
PGSC0003DMT400083315	Potato	cytosol	19.72	68.82
PGSC0003DMT400036575	Potato	mitochondrion	26.04	59.09
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	44.68	58.12
PGSC0003DMT400067386	Potato	cytosol	30.66	57.35
PGSC0003DMT400039073	Potato	cytosol	22.34	53.7
PGSC0003DMT400031544	Potato	cytosol	33.28	47.58
GSMUA_Achr7P26240_001	Banana	cytosol	24.19	47.43
CDX94358	Canola	mitochondrion, plastid	11.09	46.15
GSMUA_Achr11P...	Banana	mitochondrion, plastid	27.73	41.86
GSMUA_Achr4P07090_001	Banana	cytosol	28.04	39.57
GSMUA_Achr5P25760_001	Banana	mitochondrion	26.5	39.18
VIT_12s0059g02680.t01	Wine grape	golgi	47.92	38.83
CDY22934	Canola	nucleus, plastid	42.06	37.45
KRH56076	Soybean	endoplasmic reticulum	47.92	36.94
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	47.15	36.87
CDY43811	Canola	golgi	48.07	36.58
CDY42470	Canola	plasma membrane	48.38	36.55
GSMUA_Achr6P04430_001	Banana	cytosol	23.88	36.47
Solyc10g006540.2.1	Tomato	extracellular	52.39	36.44
Bra029012.1-P	Field mustard	plasma membrane	47.92	36.2
CDY43029	Canola	plasma membrane	48.07	36.15
GSMUA_Achr6P18370_001	Banana	nucleus	31.12	35.88
Bra002969.1-P	Field mustard	plasma membrane	48.38	35.8
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	47.92	35.71
CDY18346	Canola	plasma membrane	47.92	35.67
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	49.31	35.56
Solyc07g064010.2.1	Tomato	golgi	48.54	35.43
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	44.07	35.05
Bra039561.1-P	Field mustard	golgi	45.15	35.01
PGSC0003DMT400036332	Potato	plasma membrane	49.77	34.99
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	42.99	34.92
GSMUA_Achr7P18740_001	Banana	nucleus	27.43	34.9
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	42.84	34.88
Solyc05g046120.2.1	Tomato	plasma membrane	49.15	34.75
KRH55607	Soybean	plasma membrane	51.93	34.46
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	44.22	34.33
KRH25896	Soybean	plasma membrane	51.31	34.22
TraesCS6B01G163200.1	Wheat	plasma membrane	44.38	34.12
KRH27118	Soybean	plasma membrane	47.3	34.0
CDY53556	Canola	nucleus	44.22	33.96
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	44.38	33.88
GSMUA_Achr2P14090_001	Banana	mitochondrion	34.67	33.83
Solyc07g052730.2.1	Tomato	golgi	49.77	33.82
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	44.22	33.76
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	47.15	33.74
Os02t0161100-01	Rice	golgi	45.61	33.6
EES04559	Sorghum	plasma membrane	43.3	32.9
Zm00001d015326_P003	Maize	mitochondrion, plastid	43.61	27.96
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	19.26	26.82
GSMUA_Achr8P22610_001	Banana	plasma membrane	31.28	26.78
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	29.58	26.56
GSMUA_Achr10P...	Banana	plastid	32.36	26.15
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	31.43	24.31
GSMUA_Achr1P25960_001	Banana	mitochondrion	7.86	24.29
GSMUA_Achr5P13600_001	Banana	extracellular	9.55	20.88
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	14.95	19.96
GSMUA_Achr7P23740_001	Banana	plastid	33.9	18.35
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	15.1	14.33
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	18.64	11.18
GSMUA_Achr3P04690_001	Banana	cytosol	18.34	10.45
GSMUA_Achr6P16780_001	Banana	cytosol	17.26	9.55
GSMUA_Achr1P25970_001	Banana	cytosol	8.63	7.51
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	9.4	6.55
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	16.64	6.19
GSMUA_Achr5P13590_001	Banana	cytosol	8.01	5.65
GSMUA_Achr1P25980_001	Banana	plasma membrane	2.16	4.95
GSMUA_Achr3P13420_001	Banana	cytosol	3.7	3.87

Protein Annotations

EnsemblPlants:GSMUA_Achr3P23040_001	EnsemblPlants:GSMUA_Achr3T23040_001	EnsemblPlantsGene:GSMUA_Achr3G23040_001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
PANTHER:PTHR23213	PANTHER:PTHR23213:SF195	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	UniParc:UPI0002952F8E	UniProt:M0SH20	MapMan:20.2.2.6.1	:	:

Description

formin-like protein 3 precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G23040_001]

Coordinates

chr3:+:23840873..23847291

Molecular Weight (calculated)

71953.0 Da

IEP (calculated)

7.747

GRAVY (calculated)

-0.391

Length

649 amino acids

Sequence
(BLAST)

001: MRVSKVIRSL SPDIKHAVFK CLIRKGFHFD VFEDEHKLKN LYMECLDFIL TLRPVPRRHL ADQPPTAAPA LSPAAGPSPP PASSPDARAE PQTPSPTPSQ
101: DSDLASASSS FPNESFSDLP SDIPPPKGPK PSKKKRHAAP HAPKEEENNQ TKLVIIAVVI SSAVTSLLLA CVFCCYRKCC RESNDSFSGR DERPLLHLSL
201: SDLSAGNGNS SKTKLKPFFW DKVLANPDQS NVWNQIRSGS FQFDEEMIET LFGYNAAGKT RVEIKKQSTT GDPPIQYIQL LDPKKSQNLA ISLKALSVKK
301: QEVHEALMEG NELPSALLQT LLRMQPTTDE ELKLRLYNGD LSLLGPAEQF LRDLVDIPFA YKRMDVLLFM SSLHEDVSSI KDSFATLEAT CTELRSNRLF
401: LKLLEAVLKT GNRMNDGTYR GGAQAFKLDT LLKLSDVKGA DGKTTLLHFV VKEMIRYEGI RAARVARQSE SGDELRNLGL TVVCGLSGEL ENVKKAAGLD
501: ADAITGTVAS FGRRLIEIKQ FLNTDMRNLE EVSGFHDTLK YFVEHAEAAI TFLLEEERRI RSLVQSTTDY FHGSAAKDEG LRLFVIVRDF LGMIDKTCKE
601: VRESSKKVSK APKAKDSATA NPTPDPRQRL FPAITDRRVD SSSSDEEGP

Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Arabidopsis Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [mitochondrion,plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.