Factsheet for GSMUA_Achr3P13430_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P25960_001	Banana	mitochondrion	26.32	85.71
AT3G32400.2	Thale cress	cytosol	44.01	60.81
GSMUA_Achr5P13600_001	Banana	extracellular	26.17	60.27
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	42.69	60.08
GSMUA_Achr3P04690_001	Banana	cytosol	49.42	29.68
Bra007822.1-P	Field mustard	cytosol	46.78	28.62
CDY34742	Canola	cytosol	46.78	28.5
CDX76779	Canola	cytosol	46.49	28.47
AT2G25050.1	Thale cress	cytosol	47.81	28.0
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	42.11	26.62
GSMUA_Achr1P25970_001	Banana	cytosol	27.92	25.6
GSMUA_Achr6P16780_001	Banana	cytosol	42.4	24.72
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	52.05	24.18
KRH05363	Soybean	cytosol	48.39	22.61
GSMUA_Achr7P18740_001	Banana	nucleus	16.23	21.76
GSMUA_Achr7P26240_001	Banana	cytosol	9.8	20.24
GSMUA_Achr11P...	Banana	mitochondrion, plastid	12.28	19.53
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	14.04	19.32
GSMUA_Achr4P07090_001	Banana	cytosol	12.72	18.91
GSMUA_Achr5P25760_001	Banana	mitochondrion	11.99	18.68
GSMUA_Achr6P18370_001	Banana	nucleus	15.06	18.29
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	46.34	18.16
GSMUA_Achr6P04430_001	Banana	cytosol	11.26	18.12
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	14.33	15.1
GSMUA_Achr10P...	Banana	plastid	15.5	13.2
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	13.45	12.72
GSMUA_Achr8P22610_001	Banana	plasma membrane	14.04	12.66
GSMUA_Achr2P14090_001	Banana	mitochondrion	11.99	12.33
GSMUA_Achr5P13590_001	Banana	cytosol	16.37	12.17
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	14.91	12.16
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	12.72	9.34
GSMUA_Achr7P23740_001	Banana	plastid	15.5	8.84
GSMUA_Achr3P13420_001	Banana	cytosol	2.78	3.06
GSMUA_Achr1P25980_001	Banana	plasma membrane	1.02	2.47

Protein Annotations

EnsemblPlants:GSMUA_Achr3P13430_001	EnsemblPlants:GSMUA_Achr3T13430_001	EnsemblPlantsGene:GSMUA_Achr3G13430_001	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271
PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix
UniParc:UPI0002961873	UniProt:M0SEB0	MapMan:20.2.2.6.2	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G13430_001]

Coordinates

chr3:+:9884232..9892953

Molecular Weight (calculated)

75787.2 Da

IEP (calculated)

9.092

GRAVY (calculated)

-0.173

Length

684 amino acids

Sequence
(BLAST)

001: MASPCPQSNL MPVRNATEGA GVPPPPPPLP GPAAASSAPP PPPPPNISSQ HSTKSSSAPP VPPPPAPSSS LGSLTAPKSS GGKKTNSEVI PPPPPNGMNA
101: PPGGKGRILA PTSNYRGMQT AQALSRKANL KPLHWIKVTR AVQGSLWAES QNCDECLKAP EFDMSELESL FSAAILLLYS HLLVTVYLIA LAFLVNPMHE
201: SSIHFVSFFM EIESRLKNSK GLVRIWTFDT QKKKDKLRQV IHSVLVLTIL FIPLMRLDGK FEIIVACFLN PEEVKSVVSL RIFLGCSYFS SACKFEWPSH
301: FKFGKVRCPF VSIFVGYYGY MWGWIQSTKN NTLIRSFKDS LIDLRRANNC EIMLTKVKMP LNDLLSSVLT LDDSILDVDQ VDNLIKFCPT KEEMELLKGY
401: NGDKENLGKC EQYFLELMKV PRVESKLRVF SFKIQFQSQV ADLKASLNIV NSAAEEIRSS VKLKRIMKTI LSLGNALNQG TARGSAVGFR LDSLLKLTDT
501: RARNNRMTLM HYLCKVLADK LPELLDFPKH LVSLELAAKM QLKFLAEEMQ AINKGLEKVE QELTASENDG PVSQIFCKTL EEFLGVAEAE VRSLTSLYSN
601: VGRNADALAL YFGEDPTRCP FEQVVSTLLN FVKMFVRAHE ENCKQLEMEK KKAQKEAENE KLKINSSKNA PQNIPSTTGS ANTT

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.