Factsheet for GSMUA_Achr6P16780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063143	Potato	cytosol	19.61	73.25
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	28.05	67.7
GSMUA_Achr1P25960_001	Banana	mitochondrion	11.76	65.71
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	5.97	56.91
GSMUA_Achr5P13600_001	Banana	extracellular	14.32	56.57
CDY40774	Canola	cytosol	41.86	52.74
GSMUA_Achr1P25980_001	Banana	plasma membrane	12.7	52.65
AT5G07780.1	Thale cress	plastid	20.72	52.37
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	46.21	50.09
KRH03521	Soybean	plastid	28.82	49.93
CDY14029	Canola	cytosol	47.23	45.0
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	50.47	44.54
GSMUA_Achr3P04690_001	Banana	cytosol	42.54	43.81
KRH56878	Soybean	cytosol	45.01	43.74
KRH54596	Soybean	extracellular	47.74	43.51
CDX99025	Canola	cytosol	42.8	43.05
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	24.72	42.4
CDX69994	Canola	plastid	42.46	41.95
Bra020386.1-P	Field mustard	cytosol	16.03	41.23
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	42.8	40.58
CDY02798	Canola	cytosol	16.45	39.39
GSMUA_Achr3P13420_001	Banana	cytosol	20.29	38.39
CDX81069	Canola	nucleus	46.97	37.95
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	29.58	37.27
Bra005952.1-P	Field mustard	nucleus	46.89	37.16
CDX78309	Canola	nucleus	46.89	36.74
KRH03523	Soybean	cytosol	21.99	36.29
CDX69993	Canola	cytosol	37.51	36.27
AT5G07770.3	Thale cress	plastid	22.34	35.94
KRH63288	Soybean	cytosol	28.73	35.62
CDX99026	Canola	cytosol	37.77	34.85
Os07t0596300-02	Rice	plastid	47.49	34.23
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.4	34.17
OQU90190	Sorghum	cytosol	46.97	33.56
AT5G07740.2	Thale cress	nucleus	47.83	33.33
Zm00001d006758_P003	Maize	cytosol	45.69	33.07
GSMUA_Achr5P13590_001	Banana	cytosol	25.75	32.83
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	47.06	32.49
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	47.23	31.73
GSMUA_Achr1P25970_001	Banana	cytosol	20.03	31.5
AT5G07650.1	Thale cress	cytosol	20.8	29.94
AT5G07760.2	Thale cress	cytosol, plastid	21.4	28.95
GSMUA_Achr11P...	Banana	mitochondrion, plastid	8.78	23.95
GSMUA_Achr7P26240_001	Banana	cytosol	6.65	23.57
GSMUA_Achr5P25760_001	Banana	mitochondrion	8.35	22.32
GSMUA_Achr7P18740_001	Banana	nucleus	9.12	20.98
GSMUA_Achr4P07090_001	Banana	cytosol	7.84	20.0
GSMUA_Achr6P18370_001	Banana	nucleus	9.04	18.83
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	7.67	18.11
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	10.91	17.7
GSMUA_Achr2P14090_001	Banana	mitochondrion	9.97	17.59
GSMUA_Achr6P04430_001	Banana	cytosol	6.31	17.41
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	9.55	17.26
GSMUA_Achr10P...	Banana	plastid	11.42	16.69
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	11.94	16.69
GSMUA_Achr8P22610_001	Banana	plasma membrane	9.38	14.51
GSMUA_Achr7P23740_001	Banana	plastid	11.51	11.26

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	InterPro:FH2_Formin	EnsemblPlantsGene:GSMUA_Achr6G16780_001
EnsemblPlants:GSMUA_Achr6P16780_001	EnsemblPlants:GSMUA_Achr6T16780_001	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021	InterPro:IPR029023
UniProt:M0T7M6	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	PFscan:PS51444
PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326	SUPFAM:SSF101447
SUPFAM:SSF49562	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002963B59	SEG:seg	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G16780_001]

Coordinates

chr6:+:11191969..11206292

Molecular Weight (calculated)

132303.0 Da

IEP (calculated)

7.615

GRAVY (calculated)

-0.432

Length

1173 amino acids

Sequence
(BLAST)

0001: MALFKRLFFR KPPDRLLEIA ERVYVFDCCF STETTGECEY KNYMGGAFAQ LQGYHPDASF MVCNFRERDK RSQISDILSE YDIMVMDYPL QSKGCPLLPL
0101: VMIHHFLKSS ESWLSMEGLH NVLLMHCERE GWLVLAFMLA SLLLYGKQYT GEQKTLEMVY KQAPKEFLHL LSPLNPQPSH LRYLQYISRR GSMSDWPPRE
0201: TTFTLECLII KAIPRFDREG GCRPMVRIYR QDHLTPTSSS PKMLFATPRT KKHIHHYRQA VTTKINACCC IQGDIVIECL HLDEDLEHEE MMFRVMFNTA
0301: FVQSNILALT RDEIDLVWSA KDHFPKDFKI EVVFSNSDAS ISDTSTEMVV EGRKETQCVS KEAAEFFEAE AFSSSDWHDI KRDPYFQIHD AKRDPGRIDL
0401: DIVVPIEDKM INMSHKLEAP SMAGMLKQES SIKRSAARYD EPSSETSCCG RHTGSLVIGD EVEPRDKNRL ETLGIGFQTM SGLPTTSTKP KVNDEMSVLA
0501: DYMVACEEKN IIEVSNYQHE LKDIAESILE QRECKPNPEI TVNRKKFILV DKAHNPGNQD IENKGKFKME MHVGKDNTEN GVSESEIDLK VVRQKALYDG
0601: QMLTPKESPC TISKKIPTCI RLSDSGVIKT RIKQQESVGY EPLLNSHSNA SKPPEGAAPI LSPPPSATHG GARPPLRAPG AHGGAPPPPP PPRARTPKQR
0701: ASPHVRRLPS STVSAMPVSQ VDARGISPRH GLICPTSSVS SAPCRSSLKP LHWVKVTRAV QGSIWAELQK SEDASNASEF DVSELERLFP AVVPKNDISK
0801: TEGRHKFLGL KPDKVRLIDL RRANNTEIML TKVKIPLSDL VSAALAMDDS ILDVDQVENM IKFCPTKEEM ELLKGYTGDK DQLGKCEQYF LELMKVPRVE
0901: SKLRVFSFKI QFGSQVLDIR KSLNTIDSVC EQVCSSAKLK EIMKKILYLG NTLNQGTARG SAIGFHLDSL LKLTDTRSTN NKMTLMHYLC KALAIKSPHL
1001: LDFHEDITSL EAASKIQLKY LAEEMQAVVK GLEKVGFELQ ASENDGPISE VFLKTLKEFT AVAAAEVQSL TMLYTEVGRK ADALALYFGE DPAQCSFEQV
1101: VTTLRNFISL FRRAHQDNCK QAELEKKAEK DWGIDKSKSS TPRSRAVKDT RETNRDKNKG RSMLLNPRKH SEM

Best Arabidopsis Sequence Match ( AT5G07740.1 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.