Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017027_P001 | Maize | cytosol | 12.58 | 85.36 |
| Zm00001d022040_P002 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 87.11 | 83.11 |
| PGSC0003DMT400063143 | Potato | cytosol | 13.94 | 71.97 |
| Os07t0596300-02 | Rice | plastid | 71.31 | 71.05 |
| Zm00001d030781_P001 | Maize | cytosol | 4.44 | 67.29 |
| Solyc03g115680.2.1 | Tomato | plastid | 21.41 | 66.73 |
| KRH03521 | Soybean | plastid | 25.79 | 61.74 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 4.44 | 58.54 |
| AT5G07780.1 | Thale cress | plastid | 15.92 | 55.6 |
| CDY40774 | Canola | cytosol | 31.22 | 54.35 |
| Zm00001d030780_P001 | Maize | cytosol | 5.92 | 53.93 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 15.36 | 53.9 |
| CDY14029 | Canola | cytosol | 40.65 | 53.53 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 42.13 | 51.39 |
| CDX99025 | Canola | cytosol | 35.84 | 49.83 |
| KRH54596 | Soybean | extracellular | 39.05 | 49.18 |
| CDX69994 | Canola | plastid | 35.6 | 48.61 |
| Bra009306.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 36.4 | 47.7 |
| KRH56878 | Soybean | cytosol | 35.23 | 47.31 |
| Bra005952.1-P | Field mustard | nucleus | 41.95 | 45.95 |
| CDX81069 | Canola | nucleus | 41.09 | 45.87 |
| GSMUA_Achr6P16780_001 | Banana | cytosol | 33.07 | 45.69 |
| CDX78309 | Canola | nucleus | 42.07 | 45.56 |
| KRH63288 | Soybean | cytosol | 26.34 | 45.14 |
| Bra028684.1-P | Field mustard | cytosol, nucleus, plasma membrane | 43.06 | 42.9 |
| Bra020386.1-P | Field mustard | cytosol | 11.91 | 42.32 |
| AT5G07740.2 | Thale cress | nucleus | 43.31 | 41.71 |
| Solyc07g005500.2.1 | Tomato | cytosol | 14.19 | 41.59 |
| KRH03523 | Soybean | cytosol | 18.08 | 41.21 |
| Zm00001d050024_P001 | Maize | cytosol | 35.04 | 40.98 |
| CDY02798 | Canola | cytosol | 11.72 | 38.78 |
| AT5G07770.3 | Thale cress | plastid | 16.9 | 37.59 |
| Zm00001d018371_P001 | Maize | cytosol | 31.96 | 36.63 |
| CDX69993 | Canola | cytosol | 27.14 | 36.27 |
| CDX99026 | Canola | cytosol | 27.95 | 35.64 |
| Zm00001d032101_P001 | Maize | cytosol | 13.76 | 32.75 |
| AT5G07650.1 | Thale cress | cytosol | 15.61 | 31.04 |
| Zm00001d041515_P003 | Maize | mitochondrion | 40.9 | 30.98 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 16.16 | 30.22 |
| Zm00001d045102_P001 | Maize | cytosol | 11.23 | 28.13 |
| Zm00001d030782_P001 | Maize | mitochondrion | 31.71 | 25.16 |
| Zm00001d021173_P001 | Maize | plasma membrane | 8.39 | 17.85 |
| Zm00001d021985_P001 | Maize | plasma membrane | 8.7 | 17.78 |
| Zm00001d028089_P001 | Maize | plasma membrane | 9.32 | 17.12 |
| Zm00001d006549_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 9.62 | 16.92 |
| Zm00001d004557_P002 | Maize | golgi, plasma membrane, vacuole | 9.87 | 16.91 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 8.76 | 16.86 |
| Zm00001d017983_P001 | Maize | plasma membrane | 9.44 | 16.61 |
| Zm00001d003406_P002 | Maize | plasma membrane | 8.51 | 16.41 |
| Zm00001d032545_P001 | Maize | plasma membrane | 8.64 | 16.3 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 8.39 | 16.29 |
| Zm00001d024947_P005 | Maize | plasma membrane | 9.99 | 16.15 |
| Zm00001d032225_P001 | Maize | golgi | 8.88 | 16.14 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 9.25 | 15.69 |
| Zm00001d048142_P001 | Maize | plasma membrane | 8.33 | 15.68 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 9.01 | 15.35 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 7.96 | 12.75 |
| Zm00001d035757_P003 | Maize | plasma membrane | 6.79 | 6.54 |
Protein Annotations
| Gene3D:1.20.58.2220 | EntrezGene:103647807 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | UniProt:A0A1D6F098 |
| ncoils:Coil | InterPro:FH2_Formin | InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 |
| ProteinID:ONM24948.1 | PFAM:PF02181 | PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 |
| SUPFAM:SSF49562 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI000843A609 | EnsemblPlantsGene:Zm00001d006758 |
| EnsemblPlants:Zm00001d006758_P003 | EnsemblPlants:Zm00001d006758_T003 | SEG:seg | : | : | : |
Description
Formin-like protein 20
Coordinates
chr2:-:216069791..216101183
Molecular Weight (calculated)
176075.0 Da
IEP (calculated)
8.331
GRAVY (calculated)
-0.536
Length
1621 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKFFLK KTPDRLLEIS ENVYVFDCCF STDSMGEDEY RDYLSGIVAQ LQEFFPDTSL MASNFWSGDK RSRISDILSE YDMTVMDYPQ QYEGCPLLQL
0101: EMIHHFLKSC ENWLSVEGQH NMLLMHCERG GWPVLAFMLA GLLLYRKIYT GEQRTLEMVY KQARRDFIQQ FFPLNPQPSH LRYLHYITRQ GGGSEWPPIS
0201: RPLILDSIVL HVVPRFDTDG GCRPYLIVHG QDSSPGNKSA KVLYEMPKTK KHLQRYGQAE VPIKLSVSCH VHGDVVLEFI HIGDNIENKE TMFRVMFNTA
0301: FVQSNILELN RDDIDVAWNV NNQFPRDFRA EVHFSDPVSF KPAATIEEVA DDGDETDVAS VDTGEEFYEA EEYWHDARKD PATHSIDGGI SLNDIAEFDG
0401: GATTEERSSL EKHRSDEGVK IAVSQNFGSM NEKVAIAPTS SFENQEGLQQ PREVLPNAKL SKNNDQENSD VHDIQVVATS VDSEGHKFGS TGQEDTKGVI
0501: AQTLVTTVDL SGSDGIHCQT DEQTKMSEYP DLDYTAFGSP RSLSRTDGDA HMRTKKNEGL QNGDIKIITE NTISVDNELV IYEEKTIVVN GNAIQVVKNV
0601: VNEESIAAKI GKPITESRTS LDNDNGKIQT AKPSDIANGK LDGCRLESCL ETVPTKKTTV HDRIVVLPAT GVATEIKAKQ EVLVDKQDFG IVLPQSRTVA
0701: RARSPRLGSD DRGQIPDKAV LSVLKEMVVG NAKMEDQPKL AKPKIMRRWI SPKKESDATS VRRPSHPPSR YYSSPAALGI RSISTDGKIS VVNDAPLLSL
0801: KQPYGSNLTR EATSAQSAPS PPQKSLLLGA QSASRSQVSP PPPPPPPPAT NYSSSSTPMH MGLASTGLSN LPQGASPPRS PVAQKHAFAP PAPPPPPPPP
0901: PRSGVGGNTP PPPPPRLNNS AIAPPPPPST ITRSSAPPPP PPPQSMSRSA PPPPPPPPPS LCSNVPLPPL SCTLSAPPPP PPPPLPSMAR SAAPSPPPPP
1001: PSRGAPPPLP LGRGAPPPPP PPPPPGRGAP PPPPPPGRGA SLPPPPPPSR GAPPPPPPPV SRAGPPPPPP PPGARCGPPP PPPPPGASAP PPPPPPGARP
1101: GAPPPPPPLG ARPGAPPPPP PPGGGGRGPL PPRAPGVPTP PRAPGVPLPP GSNPSLGRGR GAVRPMGSAI GAAASRKSTL KPLHWVKVTR ALQGSLWEEL
1201: QRNTDSQSVS EFDVSELESL FPAAVPKSDD SSKSERRKSL GSKPEKVHLI ELRRANNTEI MLTKVKMPLS DLVSAALTLD QSTLDVDQVE NLIKFCPTKE
1301: EMELLKNYTG DKQILGKCEQ FFLELMKVPR MESKLRVFSF KIQFGSQVAD LRRNLDIIDS SCNEIRTSLK LKEIMKKILL LGNTLNQGTA RGNNKLALLF
1401: AVQFWAAVGF RLDSLLKLTD TRATNNKMTL MHYLCKVLAA RSPQLLNFYA DLVSLDAASK IQLKMLAEEM QAVSKGLEKV QLEYDASERD GPVSKIFREK
1501: LKEFTDNAGS DVQSLSSLFS EVGKKADALI KYFGEDPVRC PFEQVISTLL TFVTTFRKAH EENLKQAELE KKKAEKEAEA EKAKNAQLTG KNHSKSSNPS
1601: RQAKQAIERT RSVSRRGRDA G
0101: EMIHHFLKSC ENWLSVEGQH NMLLMHCERG GWPVLAFMLA GLLLYRKIYT GEQRTLEMVY KQARRDFIQQ FFPLNPQPSH LRYLHYITRQ GGGSEWPPIS
0201: RPLILDSIVL HVVPRFDTDG GCRPYLIVHG QDSSPGNKSA KVLYEMPKTK KHLQRYGQAE VPIKLSVSCH VHGDVVLEFI HIGDNIENKE TMFRVMFNTA
0301: FVQSNILELN RDDIDVAWNV NNQFPRDFRA EVHFSDPVSF KPAATIEEVA DDGDETDVAS VDTGEEFYEA EEYWHDARKD PATHSIDGGI SLNDIAEFDG
0401: GATTEERSSL EKHRSDEGVK IAVSQNFGSM NEKVAIAPTS SFENQEGLQQ PREVLPNAKL SKNNDQENSD VHDIQVVATS VDSEGHKFGS TGQEDTKGVI
0501: AQTLVTTVDL SGSDGIHCQT DEQTKMSEYP DLDYTAFGSP RSLSRTDGDA HMRTKKNEGL QNGDIKIITE NTISVDNELV IYEEKTIVVN GNAIQVVKNV
0601: VNEESIAAKI GKPITESRTS LDNDNGKIQT AKPSDIANGK LDGCRLESCL ETVPTKKTTV HDRIVVLPAT GVATEIKAKQ EVLVDKQDFG IVLPQSRTVA
0701: RARSPRLGSD DRGQIPDKAV LSVLKEMVVG NAKMEDQPKL AKPKIMRRWI SPKKESDATS VRRPSHPPSR YYSSPAALGI RSISTDGKIS VVNDAPLLSL
0801: KQPYGSNLTR EATSAQSAPS PPQKSLLLGA QSASRSQVSP PPPPPPPPAT NYSSSSTPMH MGLASTGLSN LPQGASPPRS PVAQKHAFAP PAPPPPPPPP
0901: PRSGVGGNTP PPPPPRLNNS AIAPPPPPST ITRSSAPPPP PPPQSMSRSA PPPPPPPPPS LCSNVPLPPL SCTLSAPPPP PPPPLPSMAR SAAPSPPPPP
1001: PSRGAPPPLP LGRGAPPPPP PPPPPGRGAP PPPPPPGRGA SLPPPPPPSR GAPPPPPPPV SRAGPPPPPP PPGARCGPPP PPPPPGASAP PPPPPPGARP
1101: GAPPPPPPLG ARPGAPPPPP PPGGGGRGPL PPRAPGVPTP PRAPGVPLPP GSNPSLGRGR GAVRPMGSAI GAAASRKSTL KPLHWVKVTR ALQGSLWEEL
1201: QRNTDSQSVS EFDVSELESL FPAAVPKSDD SSKSERRKSL GSKPEKVHLI ELRRANNTEI MLTKVKMPLS DLVSAALTLD QSTLDVDQVE NLIKFCPTKE
1301: EMELLKNYTG DKQILGKCEQ FFLELMKVPR MESKLRVFSF KIQFGSQVAD LRRNLDIIDS SCNEIRTSLK LKEIMKKILL LGNTLNQGTA RGNNKLALLF
1401: AVQFWAAVGF RLDSLLKLTD TRATNNKMTL MHYLCKVLAA RSPQLLNFYA DLVSLDAASK IQLKMLAEEM QAVSKGLEKV QLEYDASERD GPVSKIFREK
1501: LKEFTDNAGS DVQSLSSLFS EVGKKADALI KYFGEDPVRC PFEQVISTLL TFVTTFRKAH EENLKQAELE KKKAEKEAEA EKAKNAQLTG KNHSKSSNPS
1601: RQAKQAIERT RSVSRRGRDA G
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Arabidopsis Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.