Factsheet for Zm00001d030781_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G075500.1	Wheat	cytosol	80.37	28.1
TraesCS5D01G089100.1	Wheat	cytosol	79.44	27.78
PGSC0003DMT400063143	Potato	cytosol	67.29	22.93
AT5G07780.1	Thale cress	plastid	62.62	14.44
Solyc03g115680.2.1	Tomato	plastid	67.29	13.85
KRH03521	Soybean	plastid	69.16	10.93
AT5G07770.3	Thale cress	plastid	60.75	8.92
AT5G07650.1	Thale cress	cytosol	60.75	7.98
CDY40774	Canola	cytosol	64.49	7.41
AT5G07760.2	Thale cress	cytosol, plastid	59.81	7.38
KRH56878	Soybean	cytosol	69.16	6.13
CDX69993	Canola	cytosol	66.36	5.85
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	71.03	5.72
CDY14029	Canola	cytosol	64.49	5.61
KRH54596	Soybean	extracellular	66.36	5.52
CDX99025	Canola	cytosol	59.81	5.49
CDX69994	Canola	plastid	60.75	5.48
CDX99026	Canola	cytosol	62.62	5.27
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	60.75	5.25
KXG23793	Sorghum	cytosol	95.33	5.06
Zm00001d050024_P001	Maize	cytosol	63.55	4.91
Zm00001d041515_P003	Maize	mitochondrion	96.26	4.81
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	77.57	4.75
CDX81069	Canola	nucleus	64.49	4.75
Zm00001d018371_P001	Maize	cytosol	61.68	4.67
Bra005952.1-P	Field mustard	nucleus	63.55	4.59
HORVU5Hr1G020180.51	Barley	mitochondrion	83.18	4.56
CDX78309	Canola	nucleus	63.55	4.54
Zm00001d006758_P003	Maize	cytosol	67.29	4.44
Zm00001d021173_P001	Maize	plasma membrane	30.84	4.33
Zm00001d021985_P001	Maize	plasma membrane	31.78	4.29
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	64.49	4.24
Zm00001d013926_P001	Maize	extracellular, plasma membrane	32.71	4.19
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	66.36	4.18
AT5G07740.2	Thale cress	nucleus	64.49	4.1
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	31.78	4.04
Zm00001d028089_P001	Maize	plasma membrane	32.71	3.97
Zm00001d032545_P001	Maize	plasma membrane	31.78	3.96
Zm00001d048142_P001	Maize	plasma membrane	31.78	3.95
Zm00001d003406_P002	Maize	plasma membrane	30.84	3.92
Zm00001d032225_P001	Maize	golgi	32.71	3.92
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	33.64	3.9
Zm00001d012158_P001	Maize	extracellular, plasma membrane	33.64	3.79
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	32.71	3.7
Zm00001d042506_P002	Maize	extracellular, plasma membrane	32.71	3.66
Zm00001d024947_P005	Maize	plasma membrane	32.71	3.49
Zm00001d017983_P001	Maize	plasma membrane	29.91	3.47
Zm00001d030780_P001	Maize	cytosol	5.61	3.37
Zm00001d015326_P003	Maize	mitochondrion, plastid	29.91	3.16
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	2.8	2.44
Zm00001d017027_P001	Maize	cytosol	4.67	2.09
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	7.48	1.73
Zm00001d035757_P003	Maize	plasma membrane	21.5	1.37
Solyc07g005500.2.1	Tomato	cytosol	5.61	1.08
Zm00001d032101_P001	Maize	cytosol	3.74	0.59
Zm00001d030782_P001	Maize	mitochondrion	5.61	0.29
Os04t0245000-00	Rice	plasma membrane	0.93	0.08
Bra020386.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d045102_P001	Maize	cytosol	0.0	0.0
CDY02798	Canola	cytosol	0.0	0.0
KRH03523	Soybean	cytosol	0.0	0.0
KRH63288	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d030781_P001	EnsemblPlants:Zm00001d030781_T001	EnsemblPlantsGene:Zm00001d030781	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
PANTHER:PTHR23213	PANTHER:PTHR23213:SF218	PFAM:PF02181	PFscan:PS51444	ProteinID:ONM01523.1	SUPFAM:SSF101447
UniParc:UPI00097CD9B9	UniProt:A0A1R3LYX1	MapMan:20.2.2.6.2	:	:	:

Description

Formin-like protein 20

Coordinates

chr1:-:159403240..159403947

Molecular Weight (calculated)

12155.2 Da

IEP (calculated)

11.004

GRAVY (calculated)

-0.179

Length

107 amino acids

Sequence
(BLAST)

001: MKVPRVESKL QIFAFKIQFQ SQIRDVRKNL QTVSSACEEL RSSEKLKVIM KNILLIGNTL NQGTPRGQAV GFRLDSLLKL IDTRATSGRM TLMHFLCKVC
101: SELKSKN

Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.