CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 22945350

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63288	Soybean	cytosol	59.91	81.5
PGSC0003DMT400063143	Potato	cytosol	19.58	80.25
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	6.84	71.54
Solyc03g115680.2.1	Tomato	plastid	28.67	70.96
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	25.02	69.7
KRH03521	Soybean	plastid	35.66	67.8
CDY40774	Canola	cytosol	49.03	67.78
KRH56878	Soybean	cytosol	62.32	66.45
Zm00001d030781_P001	Maize	cytosol	5.52	66.36
KRH03523	Soybean	cytosol	36.6	66.24
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	24.86	65.84
TraesCS5D01G089100.1	Wheat	cytosol	15.46	65.03
CDY14029	Canola	cytosol	59.44	62.14
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	63.4	61.4
AT5G07780.1	Thale cress	plastid	21.76	60.34
TraesCS6A01G357300.1	Wheat	endoplasmic reticulum, golgi	15.46	59.76
CDX99025	Canola	cytosol	52.21	57.63
CDX69994	Canola	plastid	51.75	56.11
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	52.99	55.13
CDX81069	Canola	nucleus	61.46	54.48
Bra005952.1-P	Field mustard	nucleus	61.31	53.31
CDX78309	Canola	nucleus	61.46	52.84
Zm00001d030780_P001	Maize	cytosol	7.23	52.25
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	41.57	49.45
Solyc07g005500.2.1	Tomato	cytosol	21.21	49.37
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.85	48.92
AT5G07740.2	Thale cress	nucleus	63.64	48.66
GSMUA_Achr6P16780_001	Banana	cytosol	43.51	47.74
Bra020386.1-P	Field mustard	cytosol	15.77	44.52
KRH72294	Soybean	cytosol	41.57	44.25
KRH03063	Soybean	cytosol	40.71	43.38
KRH62678	Soybean	cytosol	40.09	42.79
KRH39699	Soybean	cytosol	39.63	41.6
CDX69993	Canola	cytosol	38.54	40.89
KRH15654	Soybean	cytosol, peroxisome	19.27	40.86
CDY02798	Canola	cytosol	15.54	40.82
AT5G07770.3	Thale cress	plastid	23.08	40.74
Os07t0596300-02	Rice	plastid	51.36	40.63
CDX99026	Canola	cytosol	39.24	39.73
KRH05363	Soybean	cytosol	45.14	39.69
OQU90190	Sorghum	cytosol	50.51	39.59
Zm00001d006758_P003	Maize	cytosol	49.18	39.05
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	50.51	38.26
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	47.55	35.05
AT5G07650.1	Thale cress	cytosol	21.76	34.36
AT5G07760.2	Thale cress	cytosol, plastid	22.3	33.1
HORVU5Hr1G020180.51	Barley	mitochondrion	47.32	31.21
KXG23793	Sorghum	cytosol	46.08	29.41
Zm00001d041515_P003	Maize	mitochondrion	47.79	28.74
KRH15653	Soybean	cytosol	33.57	27.29
Os04t0245000-00	Rice	plasma membrane	26.34	26.69
KRH74702	Soybean	endoplasmic reticulum	11.65	18.47
KRH63456	Soybean	cytosol	9.09	17.92
KRH69441	Soybean	golgi, plasma membrane	11.03	17.66
KRH47952	Soybean	cytosol	10.64	17.65
KRH28364	Soybean	vacuole	12.28	17.65
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	12.12	17.55
KRH04437	Soybean	plastid, vacuole	12.04	17.53
KRG92894	Soybean	endoplasmic reticulum, vacuole	12.12	17.49
KRG99223	Soybean	golgi, vacuole	10.49	17.44
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	12.04	17.44
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	12.28	17.42
KRH55607	Soybean	plasma membrane	13.21	17.38
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	11.19	17.35
KRH25896	Soybean	plasma membrane	13.05	17.27
KRH45763	Soybean	endoplasmic reticulum, vacuole	10.57	17.22
KRH33895	Soybean	plasma membrane	12.28	17.19
KRH27118	Soybean	plasma membrane	12.04	17.16
KRH54463	Soybean	endoplasmic reticulum, golgi	9.63	17.15
KRH71295	Soybean	vacuole	11.58	16.93
KRH56076	Soybean	endoplasmic reticulum	11.03	16.86
KRG96818	Soybean	plasma membrane	10.33	16.81
KRH68527	Soybean	plasma membrane	10.26	16.6
KRH50174	Soybean	vacuole	11.42	16.41
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	13.52	16.13
KRH00989	Soybean	extracellular, golgi, vacuole	12.59	15.59
KRH40232	Soybean	endoplasmic reticulum, extracellular	12.28	15.24

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100779085	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EMBL:ACUP02003546
ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GLYMA_06G196800	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:K7KW04	EnsemblPlants:KRH54596	ProteinID:KRH54596	ProteinID:KRH54596.1	PFAM:PF02181
PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799
InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002338BDD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:17731103..17744617

Molecular Weight (calculated)

143008.0 Da

IEP (calculated)

6.757

GRAVY (calculated)

-0.477

Length

1287 amino acids

Sequence
(BLAST)

0001: MALFRRFFYW KPPDHLLEIS DRLYVFDCCF SKNVLEEEEY KAYIGGIVAQ LQDHYPDASF MVLNFREGDK RSRISDIMSQ YEMTVMEYPQ KYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLA GLLLYRKQYS GEHKTLEMVY KQAPRELLHL LSPLNSQPSH LRYLQYISRR HLGSMWPPPD
0201: TPLYLDCLIL RVLPLFDGGK GCRPVVRVYG PDPSKPANRG SKLLFSTSRT QNLVRHYQQE ECMLVKIDIH CRVQGDVVLE CIHLSEDLVR EEMMFRVMFH
0301: TAFVRSNILM LSRDEIDILW DAKDQFPKDF RFEVLFLDAD AVIPNLTTFN ASEYANDTEC ASPEAEEFYE AEEIFSNIID AQEGKGDYDS PMVLDDGSHK
0401: ELWKEYSDPH TFQDFMLDDG IHQQVDDVKY KLDERVVSDT HALKDIGVDY GVTFMTKEVS VDVHDELSGM QNKCDEDNNE KKQLPSSSKP VGDTVVPKQK
0501: TKEQEPHGFQ AKQAKPNATT RWIPSNKGSY QDSMHVSYPP SRNNNSPANL SNVTSAKEKI TDAKGKSISG SYVSEVIVSM DMRNDLKSCI GDNSKSSDNI
0601: AEIDSNSPLP SLLSVKETSL QSATQTPQQS YNQMLQLHPP PPPPPPFFGQ NRGSFITPTQ WTSVYSSIAI VGQNNGALAP PPSAPSIASG AITSKVSELI
0701: DAVSVPHPPP SLPPPPPPPP PPMLSTIGAP LPPSSLPPTS FKAPPPHPPS PPLSKSTPLP SPPLSTAPPP PPLPASSGAP PPPPPPSLSR APPPPPPPTH
0801: RPPPSMHGGT PPPPPPSGRG PPPTGYRAPA APAPFGPLGG APSPSPLGTD PRGRGRGLTR PTGAGAMAAR RSSLKPLHWS KVTRALQGSL WDELQRRGDP
0901: QITQEFDVSE IEKLFSANVP KPADSDGKSG GRRKSVGSKT DKIHLIDLRR ANNTEIMLTK VKMPLPDIMA AVLAMDDSVL DVDQVENLIK FCPTKEEIEL
1001: LKGYTGDKEN LGKCEKYFLE VMKVPRVESK FRVFSFKIQF RTQITEFKKS LNTVNSACEE VRNSFKLKEI MKKILYLGNT LNQGTARGSA VGFKLDSLLK
1101: LTETRASNSK MTLMHFLCKV LAERFPGLLD FHHDLVSLEA ATKIQLKSLA EEMQAIIRGL EKVKQELAAS KNDGPVSDIF RKTLKEFIAV AESEVVSVTN
1201: LYSVVGRNAD ALALYFGEDP ARCPFEQVTV TLLNFTRLFL KAHEENSKQA ELEKKKAEKE AEMEKAKGIN LIRKSGKYEG EESGERG

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.