CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	92.19	91.68
GSMUA_Achr7P26240_001	Banana	cytosol	27.38	73.11
KRH28364	Soybean	vacuole	66.63	65.81
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	65.84	65.47
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	63.46	63.32
CDY37849	Canola	endoplasmic reticulum	36.76	61.9
GSMUA_Achr4P07090_001	Banana	cytosol	31.45	60.43
CDY08720	Canola	mitochondrion	48.98	59.56
PGSC0003DMT400055250	Potato	vacuole	59.39	59.26
Solyc02g092470.2.1	Tomato	nucleus	59.05	58.72
CDY43578	Canola	endoplasmic reticulum, extracellular	54.86	57.74
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	56.0	57.09
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	57.92	56.95
PGSC0003DMT400038519	Potato	endoplasmic reticulum	56.67	56.87
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.35	56.52
CDY36494	Canola	endoplasmic reticulum, vacuole	57.35	56.21
HORVU4Hr1G069940.1	Barley	plastid	35.41	54.06
Os03t0204100-01	Rice	plasma membrane	47.74	47.31
Bra031838.1-P	Field mustard	cytosol	22.74	45.68
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	45.81	45.51
TraesCS4D01G257700.1	Wheat	plasma membrane	45.59	45.49
HORVU4Hr1G069930.2	Barley	golgi, mitochondrion, plasma membrane	45.81	45.15
Zm00001d028089_P001	Maize	plasma membrane	45.02	45.12
TraesCS4B01G257800.1	Wheat	plasma membrane	45.48	45.02
Zm00001d048142_P001	Maize	plasma membrane	43.33	44.48
Zm00001d013926_P001	Maize	extracellular, plasma membrane	41.52	43.95
HORVU1Hr1G077850.2	Barley	mitochondrion	35.41	43.78
KXG39923	Sorghum	mitochondrion	46.49	43.68
TraesCS1A01G327400.1	Wheat	plasma membrane	39.48	43.41
Os07t0588200-01	Rice	golgi, plasma membrane, vacuole	37.56	42.89
EER97466	Sorghum	plasma membrane	37.9	42.19
KRH47952	Soybean	cytosol	36.99	42.14
Zm00001d021985_P001	Maize	plasma membrane	37.78	42.12
KRH71295	Soybean	vacuole	41.74	41.93
Zm00001d032545_P001	Maize	plasma membrane	40.72	41.91
TraesCS1B01G340800.1	Wheat	mitochondrion	39.48	41.85
KXG38231	Sorghum	plastid	42.42	41.57
TraesCS1D01G329400.1	Wheat	plastid	38.91	41.25
KRH50174	Soybean	vacuole	41.52	40.96
HORVU2Hr1G035230.1	Barley	golgi, plasma membrane, plastid	36.43	40.91
TraesCS2B01G213200.1	Wheat	plasma membrane	36.2	40.87
Os10t0347800-00	Rice	cytosol, nucleus, plastid	39.48	40.82
TraesCS2A01G193700.1	Wheat	golgi	36.09	40.64
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	43.78	35.87
KRH00989	Soybean	extracellular, golgi, vacuole	41.18	35.03
KRH40232	Soybean	endoplasmic reticulum, extracellular	40.84	34.81
KRG96818	Soybean	plasma membrane	29.19	32.62
KRH68527	Soybean	plasma membrane	28.39	31.57
KRG92894	Soybean	endoplasmic reticulum, vacuole	31.67	31.39
KRH33895	Soybean	plasma membrane	32.13	30.9
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	28.28	30.12
KRH56076	Soybean	endoplasmic reticulum	28.05	29.45
KRH63456	Soybean	cytosol	21.72	29.4
KRH27118	Soybean	plasma membrane	28.96	28.35
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	28.85	28.11
KRH74702	Soybean	endoplasmic reticulum	25.79	28.08
KRH69441	Soybean	golgi, plasma membrane	25.45	27.99
KRG99223	Soybean	golgi, vacuole	23.87	27.26
KRH45763	Soybean	endoplasmic reticulum, vacuole	24.21	27.09
KRH54463	Soybean	endoplasmic reticulum, golgi	22.06	26.97
KRH25896	Soybean	plasma membrane	29.64	26.93
KRH55607	Soybean	plasma membrane	29.3	26.48
KRH03521	Soybean	plastid	14.25	18.61
KRH39699	Soybean	cytosol	19.34	13.95
KRH62678	Soybean	cytosol	18.89	13.85
KRH15654	Soybean	cytosol, peroxisome	9.39	13.67
KRH72294	Soybean	cytosol	17.76	12.99
KRH03063	Soybean	cytosol	17.65	12.91
KRH54596	Soybean	extracellular	17.53	12.04
KRH05363	Soybean	cytosol	17.42	10.52
KRH56878	Soybean	cytosol	13.91	10.19
KRH63288	Soybean	cytosol	9.16	8.56
KRH15653	Soybean	cytosol	12.56	7.01
KRH03523	Soybean	cytosol	4.3	5.34

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100803578	MapMan:20.2.2.6.1	EMBL:ACUP02010415	InterPro:FH2_Formin	EnsemblPlantsGene:GLYMA_17G161400
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:I1MVM1	InterPro:IPR015425	EnsemblPlants:KRH04437
ProteinID:KRH04437	ProteinID:KRH04437.1	PFAM:PF02181	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276
SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233F521	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:14020928..14025906

Molecular Weight (calculated)

97562.8 Da

IEP (calculated)

9.689

GRAVY (calculated)

-0.533

Length

884 amino acids

Sequence
(BLAST)

001: MKAHHHLSFF FIISSFSLFF STSKATITNT TQLSSYNETR TRRILHQPLF PAVSAPPPVT PPPPPPPDIP SSPDIPFFNE YPAGQPPPVQ NLPPAKTSGG
101: VIANPTATQP TKPGKKVAIA ISVGIVTLGM FSALGFFLYR HRVRHPAETQ KLVSRRVLED SPRAPPLPPP SSFLYIGTVE PARTSLSEPN RMTVNTSPYR
201: KLDSIKLSSD HRYRPSPELQ PLPPPHKPPD ESHSPPAEFS DSSSSSEEES CETAFHSPRG SSLGREENFF TPVSRHSCLS AAASVVPYSK RTSPKSRFSA
301: PSPDIRNMVV PSVRPSPAEL PAPADSTTFH PVKKEMTLGP SRRPKFSSHP PAPNLTHLHS NESTTSLKPP PPPPPPPPPP LPSRKGWSPS ISSSSSSVSR
401: KNRESWSPYE GESSGNSVSV RKGPSSEEVY KRREGDDVDG AKPKLKALHW DKVSATSDRA TVWDQLKSSS FQLNEDMMET LFGCKSTGSA FKESVTRRSV
501: LPPVEPENRV LDPKKSQNIA ILLRALNVTR DEVCEALLDG NPEGLGTELL ETLVKMALTK EEEIKLKNYD GDLSRLGSAE RFLKAVLDIP LAFKRIEAML
601: YRANFETEVN YLRKSFQTLE AASEELKNSR LFLKLLEAVL RTGNRMNVGT NRGGAKSFKL DTLLKLVDIK GTDGKTTLLH FVVQEIIRSE GTGGESADEN
701: VQNQSNSQFN EDEFRKKGLQ VVAGLSRDLG NVKKAAGMDS DVLSSYVSKL EIGLDKVRLV LQCRKPDMHG NFFNSTALFL KDAEEEIVRI KADERKALFL
801: VKEVTKYFHG DAAKEEAHPF RIFMVVRDFL NSLDQVCKEV GRMQDRTVIG SARSFRIAAS ASLPVLNKYH ARQDRSSDEE GLSP

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.