Factsheet for VIT_07s0129g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26240_001	Banana	cytosol	28.56	76.44
CDY37849	Canola	endoplasmic reticulum	39.84	67.24
PGSC0003DMT400055250	Potato	vacuole	66.14	66.14
CDY08720	Canola	mitochondrion	53.95	65.75
Solyc02g092470.2.1	Tomato	nucleus	65.69	65.47
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	65.24	65.02
KRH28364	Soybean	vacuole	65.35	64.69
KRH04437	Soybean	plastid, vacuole	63.32	63.46
GSMUA_Achr4P07090_001	Banana	cytosol	32.84	63.26
CDY43578	Canola	endoplasmic reticulum, extracellular	59.82	63.1
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	62.64	62.43
CDY36494	Canola	endoplasmic reticulum, vacuole	62.98	61.86
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	62.53	61.76
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	60.38	61.71
PGSC0003DMT400038519	Potato	endoplasmic reticulum	61.29	61.63
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	62.3	61.4
HORVU4Hr1G069940.1	Barley	plastid	38.83	59.41
VIT_00s0227g00200.t01	Wine grape	cytosol	9.26	53.59
Os03t0204100-01	Rice	plasma membrane	51.24	50.9
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	50.0	49.78
TraesCS4D01G257700.1	Wheat	plasma membrane	49.55	49.55
Zm00001d028089_P001	Maize	plasma membrane	48.87	49.09
HORVU4Hr1G069930.2	Barley	golgi, mitochondrion, plasma membrane	49.55	48.94
TraesCS4B01G257800.1	Wheat	plasma membrane	49.32	48.94
Bra031838.1-P	Field mustard	cytosol	23.93	48.18
Zm00001d048142_P001	Maize	plasma membrane	46.61	47.97
KXG39923	Sorghum	mitochondrion	50.79	47.82
Zm00001d013926_P001	Maize	extracellular, plasma membrane	44.81	47.54
HORVU1Hr1G077850.2	Barley	mitochondrion	37.25	46.15
TraesCS1A01G327400.1	Wheat	plasma membrane	41.53	45.77
Zm00001d032545_P001	Maize	plasma membrane	44.24	45.63
KXG38231	Sorghum	plastid	45.6	44.79
Zm00001d021985_P001	Maize	plasma membrane	39.28	43.88
Os07t0588200-01	Rice	golgi, plasma membrane, vacuole	38.15	43.67
TraesCS1B01G340800.1	Wheat	mitochondrion	41.08	43.65
EER97466	Sorghum	plasma membrane	39.05	43.58
VIT_05s0094g00920.t01	Wine grape	nucleus	45.71	43.55
TraesCS1D01G329400.1	Wheat	plastid	40.86	43.41
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	24.04	42.69
TraesCS2B01G213200.1	Wheat	plasma membrane	37.47	42.4
HORVU2Hr1G035230.1	Barley	golgi, plasma membrane, plastid	37.47	42.19
TraesCS2A01G193700.1	Wheat	golgi	37.36	42.17
Os10t0347800-00	Rice	cytosol, nucleus, plastid	40.52	41.99
VIT_12s0059g02680.t01	Wine grape	golgi	27.88	30.84
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	32.73	30.27
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	26.3	28.55
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	26.19	28.33
VIT_17s0000g07570.t01	Wine grape	nucleus	25.85	26.97
VIT_11s0016g00160.t01	Wine grape	cytosol	18.62	14.3
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	20.43	13.85
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	18.85	12.57
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	17.16	10.33

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100249049	wikigene:100249049	MapMan:20.2.2.6.1	ProteinID:CCB57747	ProteinID:CCB57747.1
UniProt:F6HST7	InterPro:FH2_Formin	EMBL:FN596246	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR015425	EntrezGene:LOC100249049	wikigene:LOC100249049	PFAM:PF02181	PFscan:PS51444	PANTHER:PTHR23213
PANTHER:PTHR23213:SF276	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001983AED
ArrayExpress:VIT_07s0129g00220	EnsemblPlantsGene:VIT_07s0129g00220	EnsemblPlants:VIT_07s0129g00220.t01	unigene:Vvi.22598	RefSeq:XP_002279613	RefSeq:XP_002279613.1
SEG:seg	:	:	:	:	:

Description

Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6HST7]

Coordinates

chr7:-:15483931..15494241

Molecular Weight (calculated)

96969.1 Da

IEP (calculated)

9.540

GRAVY (calculated)

-0.555

Length

886 amino acids

Sequence
(BLAST)

001: MRLVCFYLFF VLLLSFSLHT AATALSQRRI LHQPLFPDSS PPPGADSPPP PPPDSQVFPN PDQPFFPEVP TGPTTDASQP PPATTNGTAP IPTATQPTKP
101: TKKVAIAISV GIVTLGMLSA LAFFLYRHRV KHPGESQKLV GGGSQSFQEE SRVPPSSFLY IGTVEPSRRS GNEANGANGT NGSPYHKLNS IKRSDRYRPS
201: PELQPLPPLN NPPVRNNSPQ AMSWSDEEGH ETVFYTPQAS SIGNDEGFYT PVSRQNSNSI NSSSATPAKT ESHGTSPVPH SKRTSPKSRR SASSPETKHA
301: IIPSIKQQPP PPPPPPPPPS RPPQQLSAQS SQLAIAHTPK RPKFSTPPPP PNVARLQALT NQFTETSTIP APPPPPPPPP LTTPRKSGSS ESSVPLIPSE
401: VLTTPQSRIL KTNSTPGNEM TKPLENGSGG ASSSGRLDAD DVDGAKPKLK PLHWDKVRAT SDRATVWDQL KSSSFQLNED MMETLFGCNS AVSIPKEATR
501: KSVLPPVEQE NRVLDPKKSQ NIAILLRALN VTRDEVSEAL LDGNPESLGA ELLETLVKMA PTKEEEIKLR DYSGDISKLG TAERFLKAVL DIPYAFKRVE
601: AMLYRANFDT EVKYLRKSFQ TLEAASEELK NSRLFLKLLE AVLRTGNRMN VGTNRGDARA FKLDTLLKLV DIKGTDGKTT LLHFVVQEII RSEDGGSDPT
701: NENLQTKSQT KMEDDFKKQG LQVVAGLSRD LGNVKKAAGM DSDVLSSYVS KLEVGLEKVK LVLQYQKPNV TGKFFDSMKL FLKEAEEEII KIKTDERKAL
801: LLVKEATEYF HGDAAKEEAH PFRIFMIVRD FLSILDQVCK EVGRMQDRTM VGSARSFRIS ATASLPVLSR YNVRQDTSSD EESSSP

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.