Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028089_P001 | Maize | plasma membrane | 87.57 | 85.49 |
| KXG39923 | Sorghum | mitochondrion | 91.75 | 83.95 |
| Os03t0204100-01 | Rice | plasma membrane | 79.91 | 77.13 |
| HORVU4Hr1G069940.1 | Barley | plastid | 50.87 | 75.65 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 76.07 | 73.93 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 75.84 | 73.37 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 76.42 | 73.36 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 75.84 | 73.12 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 26.02 | 67.67 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 58.19 | 60.0 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 30.66 | 57.39 |
| Zm00001d032545_P001 | Maize | plasma membrane | 56.45 | 56.58 |
| CDY37849 | Canola | endoplasmic reticulum | 31.94 | 52.38 |
| CDY08720 | Canola | mitochondrion | 39.37 | 46.63 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.97 | 46.61 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 43.9 | 45.0 |
| PGSC0003DMT400055250 | Potato | vacuole | 44.72 | 43.45 |
| Solyc02g092470.2.1 | Tomato | nucleus | 44.83 | 43.42 |
| KRH04437 | Soybean | plastid, vacuole | 44.48 | 43.33 |
| KRH28364 | Soybean | vacuole | 44.72 | 43.02 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.37 | 42.97 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 44.72 | 42.68 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 44.48 | 42.6 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 44.37 | 42.59 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 43.79 | 42.41 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 42.97 | 42.0 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 42.28 | 41.98 |
| Zm00001d021985_P001 | Maize | plasma membrane | 38.21 | 41.49 |
| Bra031838.1-P | Field mustard | cytosol | 20.79 | 40.68 |
| Zm00001d021173_P001 | Maize | plasma membrane | 33.8 | 38.19 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 40.53 | 36.51 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 35.31 | 36.1 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 39.84 | 36.07 |
| Zm00001d030781_P001 | Maize | cytosol | 3.95 | 31.78 |
| Zm00001d003406_P002 | Maize | plasma membrane | 27.18 | 27.82 |
| Zm00001d017983_P001 | Maize | plasma membrane | 26.25 | 24.54 |
| Zm00001d006549_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 25.44 | 23.75 |
| Zm00001d032225_P001 | Maize | golgi | 24.39 | 23.54 |
| Zm00001d004557_P002 | Maize | golgi, plasma membrane, vacuole | 25.44 | 23.15 |
| Zm00001d024947_P005 | Maize | plasma membrane | 25.67 | 22.03 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 23.81 | 20.26 |
| Zm00001d030780_P001 | Maize | cytosol | 2.9 | 14.04 |
| Zm00001d035757_P003 | Maize | plasma membrane | 24.04 | 12.3 |
| Zm00001d050024_P001 | Maize | cytosol | 18.0 | 11.18 |
| Zm00001d018371_P001 | Maize | cytosol | 16.26 | 9.9 |
| Zm00001d032101_P001 | Maize | cytosol | 7.32 | 9.25 |
| Zm00001d006758_P003 | Maize | cytosol | 15.68 | 8.33 |
| Zm00001d022040_P002 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 16.03 | 8.12 |
| Zm00001d041515_P003 | Maize | mitochondrion | 17.07 | 6.87 |
| Zm00001d017027_P001 | Maize | cytosol | 1.86 | 6.69 |
| Zm00001d030782_P001 | Maize | mitochondrion | 12.89 | 5.43 |
| Zm00001d045102_P001 | Maize | cytosol | 2.67 | 3.55 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | UniProt:A0A1D6PI14 | ProteinID:AQL08964.1 | ncoils:Coil | InterPro:FH2_Formin |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR015425 | PFAM:PF02181 | PRINTS:PR01217 |
| PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0008450876 | EnsemblPlantsGene:Zm00001d048142 | EnsemblPlants:Zm00001d048142_P001 | EnsemblPlants:Zm00001d048142_T001 | SEG:seg |
Description
Formin-like protein 6
Coordinates
chr9:-:150751083..150755678
Molecular Weight (calculated)
92362.1 Da
IEP (calculated)
9.940
GRAVY (calculated)
-0.462
Length
861 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPATVTLLP ACAVLLLCCR LSPAAAASPA DVGGGGARRV LHQPLFPIEW TPPPSPPPPP APDFTSDPAT PDGPPGDFFP PAPPTAPAGG GGTSTTTTTT
101: SSSPTTVAAD VPSASSGSGD AGHHGGPAKG TIVAAGAAAA AAIALLAFAC AFLVAGRARR HGDSQKLLSP DRGSARHRSA PSAADFLYVG TVEPATPGRH
201: RGPTAADLVG SPYRKLRSER ERARRGLGRA RDEPTDHPSP ELRPLPPLRR AATVGSDDDD AYYTPRQRSA GGGVGGETWS EASASSPPTT TTASRRSLPS
301: LTSDCFPPVA AIAAPTPSPA WSRRTPPRTR FSAGSTPDIK QVISPSPRSV QPSKPAPTPP PRPPPTPPPP PPLPKSTTAP KPPPPPPPPP RMVPSNTGLK
401: PAQPLSEPTS RRRLLKPLPP EGPRIAMPMP ITEATAQDSI GSASMPKQDD VADGIVGNGE PRPKLKPLHW DKVRATSDRA MVWDQLKSSS FQLNEDMIEA
501: LFMNNSTPSA LPRDAGRKTT VPPFRQEERV LDPKKAQNIA ILLRALNVTR DEVSDALLDE RFLKAVLDIP FAFKRVDAML YRANFEAEIN YLMKSFETLE
601: AACEDLRGSR LFLKLLEAVL RTGNRMNVGT NRGEAKAFKL DTLLKLADVK STDGKTTLLH FVVQEIIRSE DAKSEKESAM IIHSSKDEQL RKQGLKLVSG
701: LSSELGNVKK AAMMDFDVLH GYVSKLETGI EKIKSVLQLE RQCTQGQKFF TTMQSFLKKA ETEIDKVRGE EKKALVRVKD ITEYFHGDTA KEEAHPLRIF
801: MVVRDFLSTL DHVCKEVGRL QQDRTVIGSA RSFRISATSM PVLSVYGQRR ENNSDDDSAS S
101: SSSPTTVAAD VPSASSGSGD AGHHGGPAKG TIVAAGAAAA AAIALLAFAC AFLVAGRARR HGDSQKLLSP DRGSARHRSA PSAADFLYVG TVEPATPGRH
201: RGPTAADLVG SPYRKLRSER ERARRGLGRA RDEPTDHPSP ELRPLPPLRR AATVGSDDDD AYYTPRQRSA GGGVGGETWS EASASSPPTT TTASRRSLPS
301: LTSDCFPPVA AIAAPTPSPA WSRRTPPRTR FSAGSTPDIK QVISPSPRSV QPSKPAPTPP PRPPPTPPPP PPLPKSTTAP KPPPPPPPPP RMVPSNTGLK
401: PAQPLSEPTS RRRLLKPLPP EGPRIAMPMP ITEATAQDSI GSASMPKQDD VADGIVGNGE PRPKLKPLHW DKVRATSDRA MVWDQLKSSS FQLNEDMIEA
501: LFMNNSTPSA LPRDAGRKTT VPPFRQEERV LDPKKAQNIA ILLRALNVTR DEVSDALLDE RFLKAVLDIP FAFKRVDAML YRANFEAEIN YLMKSFETLE
601: AACEDLRGSR LFLKLLEAVL RTGNRMNVGT NRGEAKAFKL DTLLKLADVK STDGKTTLLH FVVQEIIRSE DAKSEKESAM IIHSSKDEQL RKQGLKLVSG
701: LSSELGNVKK AAMMDFDVLH GYVSKLETGI EKIKSVLQLE RQCTQGQKFF TTMQSFLKKA ETEIDKVRGE EKKALVRVKD ITEYFHGDTA KEEAHPLRIF
801: MVVRDFLSTL DHVCKEVGRL QQDRTVIGSA RSFRISATSM PVLSVYGQRR ENNSDDDSAS S
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.