Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37849 | Canola | endoplasmic reticulum | 57.62 | 92.19 |
| CDY08720 | Canola | mitochondrion | 72.86 | 84.18 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 85.83 | 79.93 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 84.05 | 78.53 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 28.57 | 72.51 |
| Bra031838.1-P | Field mustard | cytosol | 33.69 | 64.32 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 33.33 | 60.87 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 63.1 | 59.82 |
| PGSC0003DMT400055250 | Potato | vacuole | 59.76 | 56.66 |
| Solyc02g092470.2.1 | Tomato | nucleus | 58.93 | 55.68 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 58.45 | 55.23 |
| KRH04437 | Soybean | plastid, vacuole | 57.74 | 54.86 |
| KRH28364 | Soybean | vacuole | 58.45 | 54.86 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 57.5 | 54.33 |
| HORVU4Hr1G069940.1 | Barley | plastid | 37.38 | 54.23 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 55.0 | 53.29 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 55.6 | 53.01 |
| Os03t0204100-01 | Rice | plasma membrane | 49.52 | 46.64 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 48.57 | 46.05 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 48.57 | 45.84 |
| Zm00001d028089_P001 | Maize | plasma membrane | 47.86 | 45.58 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 48.33 | 45.46 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 48.33 | 45.26 |
| Zm00001d048142_P001 | Maize | plasma membrane | 45.0 | 43.9 |
| KXG39923 | Sorghum | mitochondrion | 48.93 | 43.68 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 42.98 | 43.23 |
| TraesCS1A01G327400.1 | Wheat | plasma membrane | 40.24 | 42.04 |
| HORVU1Hr1G077850.2 | Barley | mitochondrion | 35.71 | 41.96 |
| CDX94358 | Canola | mitochondrion, plastid | 7.62 | 41.03 |
| Zm00001d032545_P001 | Maize | plasma membrane | 41.79 | 40.86 |
| KXG38231 | Sorghum | plastid | 43.81 | 40.8 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 37.26 | 40.44 |
| EER97466 | Sorghum | plasma membrane | 38.21 | 40.43 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 37.62 | 40.36 |
| Zm00001d021985_P001 | Maize | plasma membrane | 38.1 | 40.35 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 40.0 | 40.29 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 40.71 | 40.0 |
| TraesCS2A01G193700.1 | Wheat | golgi | 37.38 | 40.0 |
| HORVU2Hr1G035230.1 | Barley | golgi, plasma membrane, plastid | 37.38 | 39.9 |
| TraesCS1D01G329400.1 | Wheat | plastid | 39.05 | 39.33 |
| CDY17909 | Canola | golgi, vacuole | 37.74 | 37.38 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 35.0 | 37.03 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 36.67 | 36.54 |
| CDY44259 | Canola | plasma membrane, vacuole | 36.31 | 36.18 |
| CDY70125 | Canola | cytosol | 19.88 | 34.79 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 30.48 | 34.36 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 42.98 | 34.09 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 43.45 | 33.92 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 31.67 | 33.42 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 30.36 | 31.76 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.71 | 31.58 |
| CDY35941 | Canola | plastid | 27.86 | 31.24 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 26.43 | 31.14 |
| CDY28040 | Canola | plastid | 28.45 | 31.04 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 26.67 | 31.02 |
| CDY22934 | Canola | nucleus, plastid | 26.79 | 30.86 |
| CDX85333 | Canola | plasma membrane | 30.0 | 30.62 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 29.17 | 30.36 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.69 | 30.24 |
| CDY43811 | Canola | golgi | 30.48 | 30.01 |
| CDY43029 | Canola | plasma membrane | 30.83 | 30.01 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.45 | 29.91 |
| CDY42470 | Canola | plasma membrane | 30.0 | 29.34 |
| CDY18346 | Canola | plasma membrane | 30.24 | 29.13 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.79 | 28.99 |
| CDY53556 | Canola | nucleus | 28.21 | 28.05 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 20.36 | 27.23 |
| CDY31597 | Canola | mitochondrion | 20.48 | 27.04 |
| CDY16239 | Canola | vacuole | 22.26 | 26.64 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 24.76 | 26.26 |
| CDY55061 | Canola | mitochondrion, nucleus | 22.5 | 25.4 |
| CDY33614 | Canola | mitochondrion, nucleus | 21.67 | 23.64 |
| CDY24501 | Canola | mitochondrion, nucleus | 22.62 | 23.49 |
| CDY27130 | Canola | cytosol, mitochondrion | 8.81 | 18.83 |
| CDY12361 | Canola | cytosol | 18.57 | 13.9 |
| CDY40774 | Canola | cytosol | 15.12 | 13.64 |
| CDY34742 | Canola | cytosol | 17.86 | 13.36 |
| CDX76779 | Canola | cytosol | 17.62 | 13.25 |
| CDX99025 | Canola | cytosol | 18.1 | 13.04 |
| CDY14029 | Canola | cytosol | 19.05 | 13.0 |
| CDY49153 | Canola | cytosol | 16.19 | 12.98 |
| CDX69994 | Canola | plastid | 17.86 | 12.64 |
| CDX99029 | Canola | cytosol | 0.24 | 12.5 |
| CDY02799 | Canola | cytosol | 18.21 | 12.23 |
| CDY32721 | Canola | cytosol | 18.1 | 12.22 |
| CDY62689 | Canola | cytosol | 18.69 | 12.15 |
| CDY12294 | Canola | cytosol | 17.62 | 12.14 |
| CDY43877 | Canola | cytosol | 17.38 | 11.08 |
| CDX69993 | Canola | cytosol | 15.71 | 10.88 |
| CDX78309 | Canola | nucleus | 19.29 | 10.82 |
| CDX81069 | Canola | nucleus | 18.69 | 10.81 |
| CDX99026 | Canola | cytosol | 15.36 | 10.15 |
| CDX69992 | Canola | cytosol | 7.74 | 8.59 |
| CDY02798 | Canola | cytosol | 5.0 | 8.57 |
| CDX99027 | Canola | nucleus | 3.69 | 3.59 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | GO:A0A078I3A8 | UniProt:A0A078I3A8 | EnsemblPlants:CDY43578 | ProteinID:CDY43578 |
| ProteinID:CDY43578.1 | ncoils:Coil | InterPro:FH2_Formin | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00076881001 | InterPro:IPR015425 | PFAM:PF02181 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 |
| SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE3CD4 | SEG:seg |
Description
BnaC02g16750DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3A8]
Coordinates
chrLK032561:+:213591..216664
Molecular Weight (calculated)
92938.5 Da
IEP (calculated)
9.699
GRAVY (calculated)
-0.620
Length
840 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVPYSILFF FPLLSVNGVK LNEIHRRILH QPLFPETSTP PDIESTPPPP PDAPDQPFFP ENPDQNQLPP PPPPPASSDV NGGLPIPTAT PTQPAKPGKR
101: IAIVVSVGIV TLGMLSALAF FLYRHKVKHA GDTQKLVNNG RGDGGSRIFH EDPRPPTTFL YMGTVEPVRG SISSGTNNNV PVNNSSPYRK LNSVKRSDRY
201: RPSPELQPLP PLSKPSDYNS PSPSSSSSDG ECRETAFYTP HGSAISSDDG YYTAFPRSGN GYSIPHSKRT SPRSKLGSGA GSRSPEMKHV IIPSIRQKQP
301: PLGGLETDEQ ELPYSKSKPK FSQPPPPPNR AAFQAITQDK PPLHTPPPPP PPPPLQIRSR DVQIPRKLTF KTRTKAVEEA KSESGEGETD PSRPKLKPLH
401: WDKVRASSDR ATVWDQLKSS SFRVNEDRME HLFGCNSASS SAPKEPVRRR SVMPPAENEN RVLDPKKSQN IAILLRALNV TREEVSEALL DGNPESLGAE
501: LLETLVKMAP TKEEEIKLRE YSGDVSKLGT AERFLKTILD IPFAFKRVEA MLYRANFDPE VKYLRNSFQT LEEASLELKA SRLFLKLLEA VLMTGNRMNV
601: GTNRGEAKAF KLDTLLKLVD IKGVDGKTTL LHFVVQEITR SEVTVDETTF HGNKDGFRKQ GLQVVAGLSR DLANVKKSAG MDSDVLSGYV TKLETGLDKL
701: RSFIKTETTT TTTSTPGKFF GSMKAFLKDA EEEIRKVKGE ERKAMSMVKE VTEYFHGDAA KEEAHPLRIF MVVRDFLGVL DNVCKEVRTM QEMSTTMGSA
801: SARSFRISAT ASLPVLHRYK ARREEEDTSS DDEHSSNSST
101: IAIVVSVGIV TLGMLSALAF FLYRHKVKHA GDTQKLVNNG RGDGGSRIFH EDPRPPTTFL YMGTVEPVRG SISSGTNNNV PVNNSSPYRK LNSVKRSDRY
201: RPSPELQPLP PLSKPSDYNS PSPSSSSSDG ECRETAFYTP HGSAISSDDG YYTAFPRSGN GYSIPHSKRT SPRSKLGSGA GSRSPEMKHV IIPSIRQKQP
301: PLGGLETDEQ ELPYSKSKPK FSQPPPPPNR AAFQAITQDK PPLHTPPPPP PPPPLQIRSR DVQIPRKLTF KTRTKAVEEA KSESGEGETD PSRPKLKPLH
401: WDKVRASSDR ATVWDQLKSS SFRVNEDRME HLFGCNSASS SAPKEPVRRR SVMPPAENEN RVLDPKKSQN IAILLRALNV TREEVSEALL DGNPESLGAE
501: LLETLVKMAP TKEEEIKLRE YSGDVSKLGT AERFLKTILD IPFAFKRVEA MLYRANFDPE VKYLRNSFQT LEEASLELKA SRLFLKLLEA VLMTGNRMNV
601: GTNRGEAKAF KLDTLLKLVD IKGVDGKTTL LHFVVQEITR SEVTVDETTF HGNKDGFRKQ GLQVVAGLSR DLANVKKSAG MDSDVLSGYV TKLETGLDKL
701: RSFIKTETTT TTTSTPGKFF GSMKAFLKDA EEEIRKVKGE ERKAMSMVKE VTEYFHGDAA KEEAHPLRIF MVVRDFLGVL DNVCKEVRTM QEMSTTMGSA
801: SARSFRISAT ASLPVLHRYK ARREEEDTSS DDEHSSNSST
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.