Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016233.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 96.65 | 93.52 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 73.45 | 90.76 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 77.84 | 79.47 |
| CDY16239 | Canola | vacuole | 65.59 | 72.51 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 69.72 | 68.31 |
| CDY70125 | Canola | cytosol | 35.7 | 57.71 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 29.12 | 53.18 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 52.45 | 49.88 |
| CDY31597 | Canola | mitochondrion | 40.72 | 49.69 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 50.52 | 49.0 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 49.48 | 48.92 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 50.13 | 47.5 |
| CDY55061 | Canola | mitochondrion, nucleus | 44.97 | 46.91 |
| KRG99223 | Soybean | golgi, vacuole | 43.3 | 43.41 |
| CDY33614 | Canola | mitochondrion, nucleus | 43.04 | 43.38 |
| CDY24501 | Canola | mitochondrion, nucleus | 44.97 | 43.14 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 43.81 | 43.04 |
| KRH69441 | Soybean | golgi, plasma membrane | 44.46 | 42.91 |
| KRH74702 | Soybean | endoplasmic reticulum | 44.85 | 42.86 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 40.98 | 41.95 |
| CDX94358 | Canola | mitochondrion, plastid | 7.73 | 38.46 |
| EES05554 | Sorghum | plasma membrane | 43.3 | 36.52 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 41.62 | 35.85 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 41.37 | 35.63 |
| TraesCS6A01G312000.2 | Wheat | plastid | 41.37 | 35.39 |
| KXG39193 | Sorghum | plastid | 38.79 | 35.33 |
| Zm00001d017983_P001 | Maize | plasma membrane | 41.75 | 35.18 |
| HORVU6Hr1G076870.4 | Barley | plastid | 41.88 | 34.69 |
| CDY37849 | Canola | endoplasmic reticulum | 20.88 | 30.86 |
| CDY08720 | Canola | mitochondrion | 26.55 | 28.34 |
| CDY22934 | Canola | nucleus, plastid | 26.55 | 28.26 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.35 | 27.6 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.09 | 27.28 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 28.99 | 26.79 |
| CDY42470 | Canola | plasma membrane | 29.25 | 26.43 |
| CDY43811 | Canola | golgi | 28.99 | 26.38 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 25.26 | 26.31 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 28.48 | 26.22 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 26.8 | 26.2 |
| CDY43029 | Canola | plasma membrane | 28.99 | 26.07 |
| CDY18346 | Canola | plasma membrane | 29.25 | 26.03 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 30.03 | 25.83 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 26.42 | 25.75 |
| CDY44259 | Canola | plasma membrane, vacuole | 27.96 | 25.74 |
| CDY53556 | Canola | nucleus | 27.06 | 24.85 |
| CDY17909 | Canola | golgi, vacuole | 26.93 | 24.65 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 25.0 | 24.16 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.13 | 23.87 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 20.62 | 22.44 |
| CDY35941 | Canola | plastid | 21.39 | 22.16 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 20.62 | 22.16 |
| CDY28040 | Canola | plastid | 21.78 | 21.95 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.12 | 21.0 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 28.61 | 20.96 |
| CDX85333 | Canola | plasma membrane | 22.16 | 20.9 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 21.52 | 20.69 |
| CDY27130 | Canola | cytosol, mitochondrion | 8.51 | 16.79 |
| CDY12361 | Canola | cytosol | 18.81 | 13.01 |
| CDX99025 | Canola | cytosol | 18.17 | 12.09 |
| CDY49153 | Canola | cytosol | 16.24 | 12.02 |
| CDX76779 | Canola | cytosol | 17.01 | 11.82 |
| CDY12294 | Canola | cytosol | 18.56 | 11.81 |
| CDY34742 | Canola | cytosol | 16.75 | 11.58 |
| CDY14029 | Canola | cytosol | 17.53 | 11.05 |
| CDX69994 | Canola | plastid | 16.88 | 11.04 |
| CDY40774 | Canola | cytosol | 12.76 | 10.63 |
| CDY02799 | Canola | cytosol | 16.37 | 10.15 |
| CDY32721 | Canola | cytosol | 16.24 | 10.13 |
| CDY62689 | Canola | cytosol | 16.75 | 10.06 |
| CDX81069 | Canola | nucleus | 18.3 | 9.78 |
| CDX78309 | Canola | nucleus | 18.56 | 9.62 |
| CDY43877 | Canola | cytosol | 15.21 | 8.95 |
| CDX69993 | Canola | cytosol | 13.92 | 8.9 |
| CDX99026 | Canola | cytosol | 14.43 | 8.81 |
| CDX69992 | Canola | cytosol | 7.09 | 7.27 |
| CDY02798 | Canola | cytosol | 4.12 | 6.53 |
| CDX99029 | Canola | cytosol | 0.13 | 6.25 |
| CDX99027 | Canola | nucleus | 3.87 | 3.48 |
Protein Annotations
| EnsemblPlants:CDY11614 | EnsemblPlantsGene:GSBRNA2T00049736001 | GO:A0A078FF87 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | PFAM:PF02181 |
| PFscan:PS51444 | ProteinID:CDY11614 | ProteinID:CDY11614.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00498 |
| SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0004EC6D7E | UniProt:A0A078FF87 | MapMan:20.2.2.6.1 | : |
Description
BnaC06g31250DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF87]
Coordinates
chrLK032012:+:513583..515913
Molecular Weight (calculated)
85003.8 Da
IEP (calculated)
9.985
GRAVY (calculated)
-0.404
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMLHQPWP FPLQVTILFI LCVVVLPYRS FSQSDSPQNI ETFFPANDLS PVPPPINPST PSSPPSNPSS SSDIGTITKA VLITAASTVV LAAAFFFFLQ
101: KCVIARRRRR RENRINVQNT LPPYPPTTTT VAATETLARE GFTRFGGVKG LILDENGLDV LYWRNLQSQR QRRSGSFRKE IVAGGEEGGS EEKEVIYYKN
201: KKKMEQVTEV PLLRGRSSTS HSIIHNDSYE LESPPSPPPP PPSIPAKKTA QPLPPPPSPP PIPVKKTAPA PPPPPPRPSP SPPPPPPMKK AAALSSSASR
301: PPPAPRGASG GESSRAGSGQ VKLKPLHWDK VNPDSDHSMV WDKIDRGSFS FDGDLMEALF GYVAVGKKSP EHDKPKSNSP TKIFILDPRK SQNSAIVLKS
401: LGMTREELVE ALVEGHDFVP ETLERLARIA PSKEEQSAIL EFDGGDAGKL ADAEAFLFHL LKAVPTAFTR LNAFLFRANY YPEIAHHGRS LQTLDLACKE
501: LRSRGLFVKL LEAILKAGNR MNAGTARGNA QAFNLTALLK LSDVKSVDGK TTLLNFVVEE VVRSEGKRCV LNRRSNSLTR STSRSSSSSN NAPQAMSKEE
601: QEKEFLKLGL PIVGGLSSEF SNVKKAASVD YDTVVATCSA LAVRAKDARK VIAQCEGGRF VEKMMTFLDS VEEEVKTARE EERKVMELVK RTTEYYQAGA
701: SVKGKNPLHL FVIVRDFLAM VDKVCLDIMR NVQRRKVASS SESTSTQRNA VKFPVLPPNF MSDRSRSDSG ESDSDM
101: KCVIARRRRR RENRINVQNT LPPYPPTTTT VAATETLARE GFTRFGGVKG LILDENGLDV LYWRNLQSQR QRRSGSFRKE IVAGGEEGGS EEKEVIYYKN
201: KKKMEQVTEV PLLRGRSSTS HSIIHNDSYE LESPPSPPPP PPSIPAKKTA QPLPPPPSPP PIPVKKTAPA PPPPPPRPSP SPPPPPPMKK AAALSSSASR
301: PPPAPRGASG GESSRAGSGQ VKLKPLHWDK VNPDSDHSMV WDKIDRGSFS FDGDLMEALF GYVAVGKKSP EHDKPKSNSP TKIFILDPRK SQNSAIVLKS
401: LGMTREELVE ALVEGHDFVP ETLERLARIA PSKEEQSAIL EFDGGDAGKL ADAEAFLFHL LKAVPTAFTR LNAFLFRANY YPEIAHHGRS LQTLDLACKE
501: LRSRGLFVKL LEAILKAGNR MNAGTARGNA QAFNLTALLK LSDVKSVDGK TTLLNFVVEE VVRSEGKRCV LNRRSNSLTR STSRSSSSSN NAPQAMSKEE
601: QEKEFLKLGL PIVGGLSSEF SNVKKAASVD YDTVVATCSA LAVRAKDARK VIAQCEGGRF VEKMMTFLDS VEEEVKTARE EERKVMELVK RTTEYYQAGA
701: SVKGKNPLHL FVIVRDFLAM VDKVCLDIMR NVQRRKVASS SESTSTQRNA VKFPVLPPNF MSDRSRSDSG ESDSDM
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.