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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 98.87 96.57
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 95.61 95.37
CDY22934 Canola nucleus, plastid 69.01 75.45
CDY53556 Canola nucleus 76.29 71.95
AT4G15200.2 Thale cress extracellular, golgi, plasma membrane 40.65 69.53
CDX94358 Canola mitochondrion, plastid 12.05 61.54
PGSC0003DMT400067386 Potato cytosol 24.09 55.33
GSMUA_Achr8P07370_001 Banana endoplasmic reticulum, golgi 30.74 49.3
VIT_12s0059g02680.t01 Wine grape golgi 45.92 45.69
GSMUA_Achr3P23040_001 Banana cytosol, mitochondrion, plastid 34.88 42.84
KRH56076 Soybean endoplasmic reticulum 45.17 42.76
KRH25436 Soybean endoplasmic reticulum, golgi, vacuole 44.42 42.65
CDY42470 Canola plasma membrane 44.29 41.09
CDY18346 Canola plasma membrane 44.67 40.83
CDY43811 Canola golgi 43.54 40.68
CDY43029 Canola plasma membrane 43.79 40.44
Solyc07g052730.2.1 Tomato golgi 46.67 38.95
PGSC0003DMT400036332 Potato plasma membrane 44.67 38.57
Solyc05g046120.2.1 Tomato plasma membrane 44.29 38.45
GSMUA_Achr2P14090_001 Banana mitochondrion 30.87 36.99
CDY70125 Canola cytosol 20.95 34.79
CDY37849 Canola endoplasmic reticulum 22.46 34.1
TraesCS6D01G124300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 35.51 33.29
Os02t0161100-01 Rice golgi 36.76 33.26
TraesCS6B01G163200.1 Wheat plasma membrane 34.76 32.82
EER99497 Sorghum endoplasmic reticulum, plasma membrane, vacuole 37.14 32.64
TraesCS6A01G135200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.76 32.59
Os04t0100300-00 Rice plasma membrane 33.63 32.56
HORVU0Hr1G015390.6 Barley cytosol, plasma membrane, plastid 34.13 32.54
Os07t0545500-01 Rice plasma membrane 37.89 32.51
Zm00001d006549_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 36.51 31.56
Zm00001d004557_P002 Maize golgi, plasma membrane, vacuole 37.39 31.5
EES04559 Sorghum plasma membrane 33.63 31.38
EES10325 Sorghum golgi 37.64 31.12
TraesCS2B01G239500.1 Wheat plasma membrane 36.01 30.5
TraesCS2A01G214500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 36.01 30.34
CDY08720 Canola mitochondrion 27.23 29.85
TraesCS2D01G220300.1 Wheat plasma membrane 35.76 29.78
Zm00001d024947_P005 Maize plasma membrane 37.26 29.61
CDY05170 Canola extracellular, golgi, plasma membrane 26.98 28.86
CDY43578 Canola endoplasmic reticulum, extracellular 30.24 28.69
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 27.6 28.35
CDX79799 Canola mitochondrion, plastid, vacuole 27.98 28.09
HORVU2Hr1G043830.5 Barley cytosol, nucleus, plastid 36.14 28.02
CDY27766 Canola golgi, plasma membrane, vacuole 27.85 27.89
CDY36494 Canola endoplasmic reticulum, vacuole 31.49 27.83
TraesCS2D01G043300.1 Wheat extracellular, plasma membrane 35.38 27.49
TraesCS2A01G044700.1 Wheat extracellular, plasma membrane 35.76 27.46
TraesCS2B01G056800.1 Wheat extracellular, plasma membrane 35.63 27.1
CDX74146 Canola extracellular, golgi, plasma membrane 27.23 27.02
CDX83457 Canola golgi, plasma membrane, vacuole 28.48 26.93
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 21.2 26.91
CDY44259 Canola plasma membrane, vacuole 28.36 26.81
CDY17909 Canola golgi, vacuole 28.48 26.77
Zm00001d015326_P003 Maize mitochondrion, plastid 33.75 26.58
CDY40709 Canola endoplasmic reticulum, plasma membrane, vacuole 26.98 26.32
CDY55061 Canola mitochondrion, nucleus 24.47 26.21
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 25.97 26.14
CDY16239 Canola vacuole 22.84 25.93
CDY31597 Canola mitochondrion 20.45 25.63
CDY33614 Canola mitochondrion, nucleus 23.46 24.29
CDY24501 Canola mitochondrion, nucleus 24.22 23.86
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 31.24 23.14
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 30.74 23.14
CDY35941 Canola plastid 21.71 23.1
CDY28040 Canola plastid 22.08 22.86
CDY07990 Canola golgi, plasma membrane, plastid 20.33 22.44
CDX85333 Canola plasma membrane 22.84 22.11
CDX74041 Canola golgi, plasma membrane, plastid 19.57 21.88
CDX86310 Canola endoplasmic reticulum, plasma membrane 21.96 21.69
CDY27130 Canola cytosol, mitochondrion 9.54 19.34
CDX99025 Canola cytosol 20.2 13.81
HORVU2Hr1G006690.1 Barley peroxisome 15.06 13.75
CDY12361 Canola cytosol 18.7 13.28
CDX69994 Canola plastid 19.45 13.06
CDY14029 Canola cytosol 19.82 12.84
CDY40774 Canola cytosol 14.93 12.78
CDX99029 Canola cytosol 0.25 12.5
CDX76779 Canola cytosol 17.44 12.44
CDY49153 Canola cytosol 16.19 12.31
CDY34742 Canola cytosol 17.19 12.2
CDY32721 Canola cytosol 18.82 12.06
CDY02799 Canola cytosol 18.82 11.99
CDY62689 Canola cytosol 19.32 11.92
CDY12294 Canola cytosol 18.19 11.89
CDX69993 Canola cytosol 16.81 11.05
CDY43877 Canola cytosol 18.07 10.93
CDX78309 Canola nucleus 20.08 10.69
CDX81069 Canola nucleus 19.07 10.47
CDX99026 Canola cytosol 16.56 10.39
CDX69992 Canola cytosol 7.28 7.66
CDY02798 Canola cytosol 4.64 7.55
CDX99027 Canola nucleus 4.77 4.4
Protein Annotations
EnsemblPlants:CDY08280EnsemblPlantsGene:GSBRNA2T00125610001Gene3D:1.20.58.2220GO:A0A078F1D3GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213PANTHER:PTHR23213:SF195PFAM:PF02181
PFscan:PS51444ProteinID:CDY08280ProteinID:CDY08280.1SEG:segSignalP:SignalP-noTMSMART:SM00498
SUPFAM:SSF101447TMHMM:TMhelixUniParc:UPI0004EDCD2DUniProt:A0A078F1D3MapMan:20.2.2.6.1:
Description
BnaA05g13390DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078F1D3]
Coordinates
chrLK031984:+:561909..564761
Molecular Weight (calculated)
87523.8 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.433
Length
797 amino acids
Sequence
(BLAST)
001: MGRLTKAFLA IFLVVLVCVS VEIIARDGAN RLRSSVSEEA HGVDMAEKTK IRCRKELKDE NKDCLVYISR EAAAANGYVK LSVLTGYGHW FGPLLDSTPR
101: RKLISKKKKF TVSAPNFALG PAPRLTPGPA PSTSPSQPSS HSPPDESNSA PVKRKPSVVA PSPSVVLSPA KKYDILMQLI IAVASTAVLT FFLVTLLFLC
201: CFRRSRSPRD GPRDEGQFLH LVDLSPGSNE TSPAAANPSR RFFSASSKKK SFLSRMSLKR SGHDQFSTAQ ASTSSGHPPP LKLPPGRTAA PPPPPPPAAP
301: APPPPQPPPP PKSKPPPPPK LVRPPPAPPK GAAGKRRGHH SSSGDASDVD SETGAPKTKL KPFFWDKMAN PDQKMVWHEI SAGSFQFNEE AMESLFGYND
401: GNKNKSGQRG ESSRDSTVQY IQIIDPRKAQ NLSILLRALN VTTEEVVEAI KEGNELPVEL LQTLLKMAPT TEEELKLRLY SGDVNLLGPA ERFLKILVDI
501: PFAFKRIESL LFMISLQEEV SGIKESLSTL EVACKKLRNS RLFLKLLEAV LKTGNRMNVG TFRGDAQAFK LDTLLKLSDV KGTDGKTTLL NFVVLEIIRS
601: EGVRALRLQS KSFSSVRTEE DTNTNNNNTD SKLEDVKRAA VIDADGLAAT LTNLSGSLTN AREFLKSMEE ESDFEKALAG FIERADADIK WLKEEEERIM
701: ALVKSSADYF HGKSAKNEGL RLFAIVRDFL IMLEKVCRHV KETTTSATKT RTHSGKKETQ VTMQEDSHQP STDIIQQRLF PAIAERRDDS SDDSDDE
Best Arabidopsis Sequence Match ( AT1G70140.1 )
(BLAST)
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.