CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99026	Canola	cytosol	90.44	86.31
CDX99029	Canola	cytosol	0.99	75.0
Zm00001d030781_P001	Maize	cytosol	5.85	66.36
PGSC0003DMT400063143	Potato	cytosol	17.07	65.92
TraesCS5D01G089100.1	Wheat	cytosol	14.01	55.56
CDY40774	Canola	cytosol	41.8	54.46
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	20.86	52.06
Solyc03g115680.2.1	Tomato	plastid	21.6	50.38
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	5.03	49.59
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	18.88	49.57
CDX99025	Canola	cytosol	44.6	46.4
CDY14029	Canola	cytosol	46.0	45.33
CDX69994	Canola	plastid	43.86	44.82
CDY27130	Canola	cytosol, mitochondrion	14.51	44.78
KRH03521	Soybean	plastid	24.65	44.17
Zm00001d030780_P001	Maize	cytosol	6.35	43.26
Solyc07g005500.2.1	Tomato	cytosol	18.38	40.33
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	42.87	39.13
KRH56878	Soybean	cytosol	38.5	38.69
KRH54596	Soybean	extracellular	40.89	38.54
CDX81069	Canola	nucleus	45.75	38.22
CDX69992	Canola	cytosol	23.66	37.91
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	33.64	37.71
CDX78309	Canola	nucleus	46.5	37.68
GSMUA_Achr6P16780_001	Banana	cytosol	36.27	37.51
CDY49153	Canola	cytosol	31.82	36.83
CDX76779	Canola	cytosol	33.64	36.53
CDY34742	Canola	cytosol	33.64	36.33
CDY12361	Canola	cytosol	32.73	35.38
CDY02798	Canola	cytosol	14.18	35.1
AT5G07740.2	Thale cress	nucleus	47.49	34.22
CDY02799	Canola	cytosol	35.12	34.05
CDY32721	Canola	cytosol	34.71	33.84
CDY62689	Canola	cytosol	35.53	33.36
CDY12294	Canola	cytosol	33.47	33.31
KRH03523	Soybean	cytosol	18.8	32.07
CDX99027	Canola	nucleus	22.51	31.63
CDY43877	Canola	cytosol	34.05	31.34
KRH63288	Soybean	cytosol	23.99	30.76
Os07t0596300-02	Rice	plastid	37.1	27.66
OQU90190	Sorghum	cytosol	37.35	27.59
Zm00001d006758_P003	Maize	cytosol	36.27	27.14
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	37.35	26.66
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	36.85	25.6
HORVU5Hr1G020180.51	Barley	mitochondrion	34.71	21.58
CDX94358	Canola	mitochondrion, plastid	2.64	20.51
KXG23793	Sorghum	cytosol	32.98	19.84
Zm00001d041515_P003	Maize	mitochondrion	34.71	19.67
CDY70125	Canola	cytosol	7.17	18.12
CDY05170	Canola	extracellular, golgi, plasma membrane	10.8	17.58
CDY22934	Canola	nucleus, plastid	10.39	17.28
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	11.05	16.81
CDY27766	Canola	golgi, plasma membrane, vacuole	10.88	16.58
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	10.63	16.15
CDY43029	Canola	plasma membrane	11.38	15.99
CDX74146	Canola	extracellular, golgi, plasma membrane	10.47	15.82
CDY37849	Canola	endoplasmic reticulum	6.84	15.81
Os04t0245000-00	Rice	plasma membrane	16.49	15.75
CDX79799	Canola	mitochondrion, plastid, vacuole	10.3	15.74
CDY43578	Canola	endoplasmic reticulum, extracellular	10.88	15.71
CDY43811	Canola	golgi	11.05	15.71
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	10.47	15.54
CDY08720	Canola	mitochondrion	9.23	15.41
CDY53556	Canola	nucleus	10.72	15.38
CDY42470	Canola	plasma membrane	10.88	15.37
CDY36494	Canola	endoplasmic reticulum, vacuole	11.38	15.3
CDY18346	Canola	plasma membrane	10.88	15.14
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	7.83	15.13
CDY55061	Canola	mitochondrion, nucleus	9.15	14.92
CDX83457	Canola	golgi, plasma membrane, vacuole	10.3	14.83
CDY17909	Canola	golgi, vacuole	10.3	14.74
CDY44259	Canola	plasma membrane, vacuole	10.22	14.71
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	8.9	13.92
CDY31597	Canola	mitochondrion	7.25	13.84
CDY28040	Canola	plastid	8.49	13.38
CDY35941	Canola	plastid	8.24	13.35
CDY24501	Canola	mitochondrion, nucleus	8.82	13.23
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.71	13.2
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.46	13.13
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	8.49	13.01
CDY16239	Canola	vacuole	7.42	12.82
CDY33614	Canola	mitochondrion, nucleus	8.08	12.73
CDX74041	Canola	golgi, plasma membrane, plastid	6.92	11.78
CDY07990	Canola	golgi, plasma membrane, plastid	6.76	11.36
CDX85333	Canola	plasma membrane	7.5	11.06
CDX86310	Canola	endoplasmic reticulum, plasma membrane	7.34	11.03

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlants:CDX69993	ProteinID:CDX69993
ProteinID:CDX69993.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00136083001	InterPro:IPR014020	InterPro:IPR015425
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0004EEE863	SEG:seg

Description

BnaA10g23420D

Coordinates

chrLK031790:-:2606478..2613747

Molecular Weight (calculated)

137794.0 Da

IEP (calculated)

6.948

GRAVY (calculated)

-0.352

Length

1213 amino acids

Sequence
(BLAST)

0001: MSLFREYFYR KAPDRLVEIS ERVYAFDCCF SNDVMGDDEY KQYLDGIVAQ LHYLYPDTSF KVCNFRAEDQ QSQISTLLSQ YGTSVMDYPN QHESVPLLPL
0101: QVISQFLISS ESWLGQQNVL LMHCERGCLP LLDFMLSALL LYYKRYHGDQ KTLELAYNQA PKELLYLSSA LNPQPSQLRY LGYISTRDLG SDWPPPEAPL
0201: VLDCLILRGL PHFEGVKDWR PSLRVLGQDH KAPANRSSIL LFSTPKTNTI YQQEECIQVK LDIQCHVQGD IVLELINLHD DLVREEIVFR IMFNTAFVRG
0301: NVLKVQSHEM DILWEAKDQF PGEFKAEVLF SDADPMVPVT ERAPPPPPMR LVDLHLHHHL LRFPLAMPGP ESGGPPPPPP PPPFRSRGPP PFHWVIPRRV
0401: IFVSSWEEIP QRHEEGQTAP EFDVSEIETL LSARVQKPAD NAPPPPPPPP PMHRGIGCGL PRPGLRSSTQ KKSSLKPFHW VKITRAARGS LWDEFQRHGE
0501: GQTATEFDIS EIETLFSPRV QKPTDKSGNQ PVWAKPEKIQ LINLKKASNV EIILWRLKMP LRDIIAAVLA MDESIVDVDQ IVNLIKFCPT KDEMELLMNY
0601: SGDKATLGNC EQYFLELMKV PRVESKLRVF SLKVHFGTQI SELKQRLDLL NSACDEVRSS QKLKEIMKRI DYLGKKNQGP ARGKTIAMRS PGVTVGFKLK
0701: NLLNVGHTRG ASSMQHLCKD LASKESDLMD FHKDLESLES ASKIQLKSLD EDMQAIIKGL NILNQELTAS DSDGPASEVF HKLLKELVSK AETEVASVSS
0801: LYSVVGENVD ALVYYVGENP IHCPFEQVTA NLVNFVRLFK KAHEENVKQA DLEKKEAAKD KKVKKGTGLS LTRKVIDPDR ADNLEIMLWR VKMPLPDMMA
0901: AVQAMDDTVL DIDQIEKLIM FCPTKEEMKL LNNYTGDKER LGKCEQYFLE LMKVPRVESK LRVFSFKIQF HTQVEELRKS LNVVKSACEE IRSSQKLKGI
1001: MKRILYLGNT LNQGTVRGAA VGFKLESLLT LSDTRAANSK MTLMHYLCKV FASKASHLLD FHKDLENLES ASKIQLRSLA QEMQAISKGL EILNQELTAS
1101: ERDGPVSEVS HKRLKDFMHI AEIEVRALIR LYTETGRNAD SLLHYFGEDP CRYSFEEVTG TLAKFIRLFK KANEETVEQV ELEKMEAAKE ARMKMAKGAG
1201: CNKRKEVDII TDP

Best Arabidopsis Sequence Match ( AT5G07650.2 )
(BLAST)

001: MSLVEISGSD AMAAPMPGRV PPPPPRPPPM PRRLPPMFDA FDHTGAGMVW GFPRPAKKRA SLKPLHWVKI TSDLQGSLWD ELQRRHGDSQ TAIELDISEL
101: ETLFFVEAKP EKIRLHDLRR ASYRVFNVRS YYMRANNKVI NLSMPLPDMM TAVLAMDESV VDVDQIEKLI KFCPTNEEME LLKTYTGDKA ALGKYEQYLL
201: ELMKVPRLEA KLRVFSFKTQ FGTKITELKE RLNVVTSACE EVRSSEKLKE IMKKIPCLGN TSNQGPDRGK SSVVDKNLSF SSGIQLKEIM KKIPCLGNTS
301: KSNPRVGVKL DSSVSDTHTV KSMHYYCKVL ASEASELLDV YKDLQSLESA SKIQVKSLAQ NIQAIIKRLE KLKQELTASE TDGPASEVFC NTLKDFISIA
401: ETEMATVLSL YSVVRKKADA LPPYFGEDPN QCPFEQLTMT LFNFIKLFKK AHEENVKQAD LEKKKAMKQI DLRRANDTEI MLTKVNIPLA DMMAAVLGMD
501: EYVLDVDQIE NLIRFCPTKE EMELLKNYTG DKATLGKCEQ YFLEVMKVPG VESKLRAFSF KIQFGTQIAE LNKGLNAVNS ACEEVRTSEK LKEIMANILC
601: MGNILNQGTA EGSAVGFKLK SLLILSDTCA PNSKMTLMHY LCKVLASKAS DLLDFHKDLE SLESASKIQL KSLAEEIQAI TKGLEKLNKQ LTASESDGPV
701: SQVFRKVLKD FISMAETQVA TVSSLYSSVG KNADALAHYF GEDPNHYPFE KVTTTLLSFI RLFKKAHEEN VKQADLDKNK DAKEAEMEKT K

Arabidopsis Description

Actin-binding FH2 protein [Source:TAIR;Acc:AT5G07650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.