CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005952.1-P	Field mustard	nucleus	98.6	99.73
CDX81069	Canola	nucleus	93.19	96.07
CDY14029	Canola	cytosol	73.48	89.36
CDY40774	Canola	cytosol	54.58	87.76
CDX99029	Canola	cytosol	0.94	87.5
PGSC0003DMT400063143	Potato	cytosol	16.23	77.39
AT5G07740.2	Thale cress	nucleus	84.1	74.81
CDX99025	Canola	cytosol	57.18	73.41
Solyc03g115680.2.1	Tomato	plastid	25.45	73.27
KRH03521	Soybean	plastid	32.06	70.9
CDX69994	Canola	plastid	55.31	69.76
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	21.38	69.26
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	5.34	65.04
Zm00001d030781_P001	Maize	cytosol	4.54	63.55
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	54.91	61.85
TraesCS5D01G089100.1	Wheat	cytosol	12.63	61.76
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	19.97	61.52
KRH54596	Soybean	extracellular	52.84	61.46
KRH56878	Soybean	cytosol	46.43	57.58
KRH63288	Soybean	cytosol	35.34	55.92
KRH03523	Soybean	cytosol	25.72	54.15
CDX69992	Canola	cytosol	25.78	50.99
Zm00001d030780_P001	Maize	cytosol	5.95	50.0
Solyc07g005500.2.1	Tomato	cytosol	18.3	49.55
CDY27130	Canola	cytosol, mitochondrion	12.96	49.36
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	35.0	48.43
CDY12361	Canola	cytosol	35.54	47.42
CDX76779	Canola	cytosol	35.27	47.27
CDY34742	Canola	cytosol	35.27	47.02
GSMUA_Achr6P16780_001	Banana	cytosol	36.74	46.89
CDX69993	Canola	cytosol	37.68	46.5
CDY49153	Canola	cytosol	31.86	45.52
CDX99026	Canola	cytosol	38.28	45.08
CDY32721	Canola	cytosol	36.54	43.97
CDY02799	Canola	cytosol	36.61	43.8
Os07t0596300-02	Rice	plastid	47.56	43.76
CDY62689	Canola	cytosol	37.68	43.65
OQU90190	Sorghum	cytosol	47.7	43.48
CDY02798	Canola	cytosol	14.23	43.47
CDY12294	Canola	cytosol	34.94	42.9
Zm00001d006758_P003	Maize	cytosol	45.56	42.07
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	47.63	41.97
CDY43877	Canola	cytosol	35.67	40.52
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	41.82	35.85
HORVU5Hr1G020180.51	Barley	mitochondrion	45.22	34.7
KXG23793	Sorghum	cytosol	44.29	32.89
Zm00001d041515_P003	Maize	mitochondrion	45.96	32.15
CDX99027	Canola	nucleus	17.77	30.82
Os04t0245000-00	Rice	plasma membrane	25.38	29.92
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	8.62	20.54
CDY22934	Canola	nucleus, plastid	9.89	20.3
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	10.69	20.08
CDY05170	Canola	extracellular, golgi, plasma membrane	9.89	19.87
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	10.49	19.65
CDY43029	Canola	plasma membrane	11.22	19.47
CDY27766	Canola	golgi, plasma membrane, vacuole	10.29	19.35
CDY43578	Canola	endoplasmic reticulum, extracellular	10.82	19.29
CDX94358	Canola	mitochondrion, plastid	2.0	19.23
CDY42470	Canola	plasma membrane	11.02	19.21
CDY36494	Canola	endoplasmic reticulum, vacuole	11.56	19.18
CDY70125	Canola	cytosol	6.15	19.17
CDY43811	Canola	golgi	10.89	19.11
CDY08720	Canola	mitochondrion	9.22	18.98
CDY18346	Canola	plasma membrane	11.02	18.92
CDY53556	Canola	nucleus	10.55	18.7
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	9.62	18.56
CDX79799	Canola	mitochondrion, plastid, vacuole	9.75	18.39
CDY44259	Canola	plasma membrane, vacuole	10.29	18.27
CDX83457	Canola	golgi, plasma membrane, vacuole	10.22	18.15
CDY37849	Canola	endoplasmic reticulum	6.35	18.1
CDY55061	Canola	mitochondrion, nucleus	8.88	17.88
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	9.69	17.75
CDX74146	Canola	extracellular, golgi, plasma membrane	9.42	17.56
CDY17909	Canola	golgi, vacuole	9.75	17.22
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	9.08	17.17
CDY16239	Canola	vacuole	8.02	17.09
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.82	16.71
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.96	16.64
CDY31597	Canola	mitochondrion	6.95	16.35
CDY35941	Canola	plastid	8.15	16.29
CDY28040	Canola	plastid	8.28	16.1
CDY24501	Canola	mitochondrion, nucleus	8.62	15.95
CDX74041	Canola	golgi, plasma membrane, plastid	7.41	15.57
CDY07990	Canola	golgi, plasma membrane, plastid	7.41	15.37
CDY33614	Canola	mitochondrion, nucleus	7.82	15.19
CDX85333	Canola	plasma membrane	7.35	13.37
CDX86310	Canola	endoplasmic reticulum, plasma membrane	7.08	13.14

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlants:CDX78309	ProteinID:CDX78309
ProteinID:CDX78309.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00129664001	InterPro:IPR014020	InterPro:IPR015425
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0004EED63C
SEG:seg	:	:	:	:	:

Description

BnaA03g02210D

Coordinates

chrLK031815:-:113555..121926

Molecular Weight (calculated)

162448.0 Da

IEP (calculated)

7.083

GRAVY (calculated)

-0.642

Length

1497 amino acids

Sequence
(BLAST)

0001: MALFRRFFYK KPPDHLLEIS ERLYVFDCCF SSDVMGEDEY KLYLGGIVAQ LQDHFPDASF MVFNFREGDQ RSQISDVLSQ YDMTVMDYPR HYESCPLLPL
0101: EMIHHFLKSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYQ GEVKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR DLGSDWPPSD
0201: TPLLLDCLIL RDLPRFEGRE GCRPIVRVYG QDPKARANRS SVVLFSTPKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVR EEIIFRIMFH
0301: TAFVRANILI VQREEMDILW DAKDQFPKEF KAEVLFSGAD SVVPTIATAP VSDDDESDFD MASPDEFYEV EEIFSDAVDG HELKRGDSDG FVVVDSASDD
0401: SEGKEVWKGD VEPNAFLDCA SDDSNHKHEA SADPVKDITV DDVQYRSDGT SIDSVKDIGI DDGDEQRKRR TMEAKENDSR TAEKAQAKPR KQVGANAKLA
0501: GDALKPKSNV RMAKPNAVSR WIPSNKGSYK DSMHVAYPHT RINSAPASIT TSLKDGKRAT SPDGVVTKEA KSKNLRASVS SPDVRSRAPS CLSPEFSPKE
0601: KPPSLPASPH YAPPPPQHSP SPPEQPSLSS EAASPPPPPP PPPTYSSPSQ NDSYSQTSQI PPPPPPPPFA SKRPNSGSML PPPPPPPPLA SEKPKTGTVL
0701: PPLPLSPPWK SVFASALATP TTCSTSQPPP PPQTSSQSQT SQLPLPPSPP PPPPFASVRR NSETMLPPPP PPPPWKSVYT STLETHEACS TSNNFPPPPP
0801: PPLPPFSSSK ENGDHVTPSS LPYLSNAPSP SPKSSPINGF SAPPPPFSKP HSVPPPPPPS YGSPTPPPPQ PPSYGTPPPP PPPFGKTSPP PPPPPPPFGS
0901: SGPPPPPPPP PFGSNLGGPP PPPPPPMGAP PPPPPPMHRG APPPPPRSEE PPPPPPPPMR GGAPPPPPPP MLGGAPPPPP PPMRGGAPPP PPPPMLGGAP
1001: PPPPPPMRGG APPPPPPPGG RAPGGPPPPP PPGGRAPGPP PPPGPRPPGG GPPPPPGPRP PGGGPPDLKG AGRGRGLSRP GLGSSAQKKS SLKPLHWVKV
1101: TRALQGSLWD ELQRQGQTAP EFDVSEIETL FSAIVPKPVD KSRKKSVGAK PEKIQLIDLR RANNTEIMLT KVKMPLPDMM AAVLAMDDTV LDSDQIENLI
1201: KFCPTKEEME LLKNYTGDKA VLGKCEQYFL ELMKVPRVES KMRVFSFKIQ FGTQITEFKK SLTAVNSACE EVRTSPKLKE IMKKILYLGN TLNQGTARGA
1301: AVGFKLDSLS KLSDTRAANS KMTLMHYLCK VLASQGSDLL DFPKDLESLE SASKIQLKSL AEEMQAIIKG LEKLNQELNA SESDGPVSEV FRKTLKDFIS
1401: VATTETAAVT SLYSVVGNNA DALAHYFGED PKRCPFEQVT ATLLNFIRLF KKAHEENIKQ EELEKKKAAK EAEMEKEKEK EKAKGVNLTK TADDDDS

Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.