CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69993	Canola	cytosol	86.31	90.44
CDX99029	Canola	cytosol	0.94	75.0
PGSC0003DMT400063143	Potato	cytosol	16.29	65.92
Zm00001d030781_P001	Maize	cytosol	5.27	62.62
TraesCS5D01G089100.1	Wheat	cytosol	13.14	54.58
CDY40774	Canola	cytosol	39.5	53.92
Solyc03g115680.2.1	Tomato	plastid	21.32	52.12
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	19.91	52.06
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	4.96	51.22
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	18.02	49.57
CDX99025	Canola	cytosol	42.96	46.83
KRH03521	Soybean	plastid	24.55	46.09
CDY14029	Canola	cytosol	44.37	45.82
CDX69994	Canola	plastid	42.56	45.58
CDY27130	Canola	cytosol, mitochondrion	13.45	43.51
Zm00001d030780_P001	Maize	cytosol	5.98	42.7
Solyc07g005500.2.1	Tomato	cytosol	17.55	40.33
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	41.7	39.88
KRH54596	Soybean	extracellular	39.73	39.24
CDX81069	Canola	nucleus	44.53	38.98
KRH56878	Soybean	cytosol	36.35	38.28
CDX78309	Canola	nucleus	45.08	38.28
CDX69992	Canola	cytosol	22.74	38.18
GSMUA_Achr6P16780_001	Banana	cytosol	34.85	37.77
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	31.79	37.34
CDX76779	Canola	cytosol	32.81	37.33
CDY34742	Canola	cytosol	32.81	37.13
CDY49153	Canola	cytosol	30.53	37.02
CDY12361	Canola	cytosol	31.71	35.92
CDY02798	Canola	cytosol	13.53	35.1
AT5G07740.2	Thale cress	nucleus	46.42	35.06
CDY02799	Canola	cytosol	33.52	34.05
CDY32721	Canola	cytosol	33.2	33.92
CDY62689	Canola	cytosol	34.3	33.75
CDY12294	Canola	cytosol	32.34	33.72
CDX99027	Canola	nucleus	21.64	31.87
KRH03523	Soybean	cytosol	17.78	31.79
CDY43877	Canola	cytosol	32.81	31.64
KRH63288	Soybean	cytosol	23.52	31.61
Os07t0596300-02	Rice	plastid	36.66	28.64
OQU90190	Sorghum	cytosol	36.82	28.5
Zm00001d006758_P003	Maize	cytosol	35.64	27.95
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	36.82	27.55
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	34.93	25.43
HORVU5Hr1G020180.51	Barley	mitochondrion	33.36	21.73
CDX94358	Canola	mitochondrion, plastid	2.52	20.51
KXG23793	Sorghum	cytosol	31.94	20.14
Zm00001d041515_P003	Maize	mitochondrion	33.75	20.05
CDY05170	Canola	extracellular, golgi, plasma membrane	10.39	17.72
CDY70125	Canola	cytosol	6.69	17.71
CDY22934	Canola	nucleus, plastid	10.07	17.56
CDY27766	Canola	golgi, plasma membrane, vacuole	10.54	16.83
CDY43029	Canola	plasma membrane	11.25	16.57
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	10.39	16.56
CDY43811	Canola	golgi	10.94	16.3
Os04t0245000-00	Rice	plasma membrane	16.13	16.14
CDX74146	Canola	extracellular, golgi, plasma membrane	10.15	16.06
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	10.07	16.02
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	7.87	15.92
CDY08720	Canola	mitochondrion	9.05	15.82
CDY37849	Canola	endoplasmic reticulum	6.53	15.81
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	10.15	15.79
CDY36494	Canola	endoplasmic reticulum, vacuole	11.01	15.52
CDY53556	Canola	nucleus	10.31	15.5
CDX79799	Canola	mitochondrion, plastid, vacuole	9.6	15.37
CDY43578	Canola	endoplasmic reticulum, extracellular	10.15	15.36
CDY55061	Canola	mitochondrion, nucleus	8.97	15.32
CDY42470	Canola	plasma membrane	10.23	15.13
CDY18346	Canola	plasma membrane	10.31	15.02
CDY44259	Canola	plasma membrane, vacuole	9.83	14.83
CDX83457	Canola	golgi, plasma membrane, vacuole	9.76	14.71
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	8.81	14.43
CDY17909	Canola	golgi, vacuole	9.6	14.39
CDY31597	Canola	mitochondrion	7.08	14.15
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.41	13.48
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.17	13.41
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	8.34	13.38
CDY28040	Canola	plastid	8.1	13.38
CDY24501	Canola	mitochondrion, nucleus	8.5	13.35
CDY35941	Canola	plastid	7.79	13.22
CDY16239	Canola	vacuole	7.16	12.96
CDY33614	Canola	mitochondrion, nucleus	7.71	12.73
CDX74041	Canola	golgi, plasma membrane, plastid	6.69	11.92
CDY07990	Canola	golgi, plasma membrane, plastid	6.61	11.63
CDX85333	Canola	plasma membrane	7.4	11.42
CDX86310	Canola	endoplasmic reticulum, plasma membrane	7.24	11.4

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlants:CDX99026	ProteinID:CDX99026
ProteinID:CDX99026.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00107153001	InterPro:IPR014020	InterPro:IPR015425
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0004EEDDCA	SEG:seg

Description

BnaC09g48090D

Coordinates

chrLK031907:+:1188752..1196079

Molecular Weight (calculated)

143754.0 Da

IEP (calculated)

6.974

GRAVY (calculated)

-0.381

Length

1271 amino acids

Sequence
(BLAST)

0001: MSLFRKYFYR KAPDRIVEIS ERVYAFDCCF SNNVMGEDEY KQYLDGIVAQ LHYLYPDASF KVCNFRTEDQ QSQLSTLLSQ YGMSVMDYPN QHESVPLLPL
0101: QVISQLLISS ESWLGQQNVL LMHCERGCLP LLDFMLSAVL LYNKRYHGDQ KTLELAYNQA PKELLCLSSA LNTQPSQLRY LGYISTRDLG SDWPPPEAPL
0201: LLDCLILRGL PHFQGVKDWR PSLRILGQDH KAPANRSSIL LFSTPKTNTF YQQEECIQVK LDIQCHVQGD IVLELINLHD DLVREEMVFR IMFNTAFVRG
0301: NVLKVQSDEM DILWEAKDQF PGEFKAEVLF SDPLVPVTET APPMRRGAPP PPFGSGGPPP PPPPFPFRSR EPPPPPPPLM RRGAPPPPPF RSGGPPPPPP
0401: PPPFRSRGPP PFHWVIPRRV IFVSSWEEIP QRHEEGQTAP EFDVSEIETL LSARVQNPAD NAPPPPPPPP PMHRGIGCGL PRPGLRSSTQ KKSSLKPFHW
0501: VKITRAARGS LWDEFQRHGE GQTAPEFDIS ELETLFSAKV QKPTDKSGNQ PVWAIPETIQ LINLKKARNV EIILWRLKIP LRDIIAAVLA MDESIVDIDQ
0601: IVNLTKFCPT KDEMELLMNY SGDKATLGNC EQYFLELMKV PRVESKLRVF SLKVHFGTQI SELKQRLDLL NSACDEVRSS QKLKEIMKRI DYLGNTNQGP
0701: ARGKTISLRS PGVAVGFKLK NLLKVGHTRG ASSMQHLCKD LASKESDLMD FHKDLESLES ASKIQLKSLD EDMQAIIKGL NILNQELTAS ESDGPASEVF
0801: QKLLKEFVSI AETEVASVSS LYSVVGENVD ALVYYVGENP IHCPFEQVTA DLLNFVRLFK KAHEENVKQA ELEKKEAAED KKLKKGKGLS LTRKVIDPDR
0901: ADNLEIMLWR VKMPLPDMMA AVQAMDDTVL DIDQIEKLIS FCPTKEEMEL LNNYTGDKER LGKCEQYFLE LMKVPRVELK LRVFSFKIQF HTQVWCPSNC
1001: RFLILFVNDD FSVQVTELRK SLREKDKNST KSSLCSQTST QGQKFAQSLN AVKSACEEIR SSQKLKGIMK RILYLGNTLN QGTVRGAAVG FKLECLLALS
1101: DTRAANSKMT LMHYLCKVFA SKASHLLDFH KDLENLESAS KIQLKSLAED MQAISKGLEM LDQELTASER DGLVSEVSYK RLKDFMRIAE TEVEAISRLY
1201: TETGRNADAL AHYFGEDPSR YPFEQVTGTL AKFVSLWKKT HEENVEQAEL EKMGAAKEAR MKKAKEQFGS H

Best Arabidopsis Sequence Match ( AT5G07650.2 )
(BLAST)

001: MSLVEISGSD AMAAPMPGRV PPPPPRPPPM PRRLPPMFDA FDHTGAGMVW GFPRPAKKRA SLKPLHWVKI TSDLQGSLWD ELQRRHGDSQ TAIELDISEL
101: ETLFFVEAKP EKIRLHDLRR ASYRVFNVRS YYMRANNKVI NLSMPLPDMM TAVLAMDESV VDVDQIEKLI KFCPTNEEME LLKTYTGDKA ALGKYEQYLL
201: ELMKVPRLEA KLRVFSFKTQ FGTKITELKE RLNVVTSACE EVRSSEKLKE IMKKIPCLGN TSNQGPDRGK SSVVDKNLSF SSGIQLKEIM KKIPCLGNTS
301: KSNPRVGVKL DSSVSDTHTV KSMHYYCKVL ASEASELLDV YKDLQSLESA SKIQVKSLAQ NIQAIIKRLE KLKQELTASE TDGPASEVFC NTLKDFISIA
401: ETEMATVLSL YSVVRKKADA LPPYFGEDPN QCPFEQLTMT LFNFIKLFKK AHEENVKQAD LEKKKAMKQI DLRRANDTEI MLTKVNIPLA DMMAAVLGMD
501: EYVLDVDQIE NLIRFCPTKE EMELLKNYTG DKATLGKCEQ YFLEVMKVPG VESKLRAFSF KIQFGTQIAE LNKGLNAVNS ACEEVRTSEK LKEIMANILC
601: MGNILNQGTA EGSAVGFKLK SLLILSDTCA PNSKMTLMHY LCKVLASKAS DLLDFHKDLE SLESASKIQL KSLAEEIQAI TKGLEKLNKQ LTASESDGPV
701: SQVFRKVLKD FISMAETQVA TVSSLYSSVG KNADALAHYF GEDPNHYPFE KVTTTLLSFI RLFKKAHEEN VKQADLDKNK DAKEAEMEKT K

Arabidopsis Description

Actin-binding FH2 protein [Source:TAIR;Acc:AT5G07650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.